The system now uses a combination of the LMOD module system and the EasyBuild automatic build framework. Although, largely compatible LMOD has some differences in usage and module names as documented below.
Basics
LMOD uses a hierarchical module scheme, where not all modules are visible at any given time. You can list the module currently available with the avail
option.
> module avail
You can load a module with the load
option.
> module load foo
Note: If no version is specified, the default version is automatically chosen. If only a single version is available of a certain module, then this will automatically become the default. Default versions of modules are marked with (D)
in the list of available modules.
When loading a module, the module system may set module-specific variables in the environment. This may influence the PATH
and LD_LIBRARY_PATH
, influencing executables and libraries visible to the user. To remove any modifications to the environment by a specific module, you can unload specific modules with the unload
option.
> module unload foo
To unload all modules at once, you can purge
the module environment, which unloads all loaded modules.
> module purge
To get a list of all loaded modules, you can use the list
option.
> module list
If you don't know how a specific module is called or a module is currently not visible to you and you want search for a software, you can use the spider
option.
> module spider foo
> module spider foo/1.2.3
Note: Searching for a module with spider
is case in-sensitive and also returns partial matches (the search argument is part of an existing module). Further note that spider
searches in the module name and the description.
To unload a module and load a module with one call, you can use the switch
option.
> module switch foo bar
NOTE: LMOD automatically unloads conflicting modules and inactivates modules that are no longer available.
> module spider foo
When called with only with the module name and no specific version, the output of spider
lists all available version across all toolchains. When called with a specific version, the output lists toolchains that will make it available.
> module spider foo/1.2.3
If you want to reset the module environment to the system default, you can use the reset
option.
> module reset
Core Compiler
For all packages a certain version of GCC is automatically loaded as GCCcore
module. The GCCcore
module will be part of the dependencies for making a certain module visible.
Toolchains
Toolchains are so-called meta modules that load a specific Compiler and MPI combination (and in some cases some additional libraries).
Existing Toolchains
Intel-based
Toolchain | Compiler | MPI | Others |
---|---|---|---|
intel/2019b | iccifort/2019.5.281 | impi/2021.6.0 | imkl/2019.5.281 |
intel/2020a | iccifort/2020.1.217 | impi/2021.6.0 | imkl/2020.1.217 |
intel/2020b | iccifort/2020.4.304 | impi/2021.6.0 | imkl/2020.4.304 |
intel/2021a | iccifort/2020.1.217 | impi/2021.6.0 | imkl/2020.1.217 |
intel/2021b | intel-compilers/2021.4.0 | impi/2021.6.0 | imkl/2021.4.0 imkl-FFTW/2021.4.0 |
iompi/2020a | iccifort/2020.1.217 | OpenMPI/4.0.3 | |
iompi/2020b | iccifort/2020.4.304 | OpenMPI/4.0.5 | |
iompi/2021a | intel-compilers/2021.2.0 | OpenMPI/4.1.1 | |
iomkl/2020a | iccifort/2020.1.217 | OpenMPI/4.0.3 | imkl/2020.1.217 |
iomkl/2020b | iccifort/2020.4.304 | OpenMPI/4.0.5 | imkl/2020.4.304 |
iomkl/2021a | intel-compilers/2021.2.0 | OpenMPI/4.1.1 | imkl/2021.2.0 |
GCC-based
Toolchain | Compiler | MPI | Others |
---|---|---|---|
foss/2020a | GCC/9.3.0 | OpenMPI/4.0.3 | OpenBLAS/0.3.9 FFTW/3.3.8 ScaLAPACK/2.1.0 |
foss/2021a | GCC/10.3.0 | OpenMPI/4.1.1 | FlexiBLAS/3.0.4 FFTW/3.3.9 ScaLAPACK/2.1.0-fb |
foss/2021b | GCC/11.2.0 | OpenMPI/4.1.1 | FlexiBLAS/3.0.4 FFTW/3.3.10 ScaLAPACK/2.1.0-fb |
gompi/2020a | GCC/9.3.0 | OpenMPI/4.0.3 | |
gompi/2020b | GCC/10.2.0 | OpenMPI/4.0.5 | |
gompi/2021a | GCC/10.3.0 | OpenMPI/4.1.1 | |
gompi/2021b | GCC/11.2.0 | OpenMPI/4.1.1 | |
gomkl/2020a | GCC/9.3.0 | OpenMPI/4.0.3 | imkl/2020.1.217 |
gomkl/2020b | GCC/10.2.0 | OpenMPI/4.0.5 | imkl/2020.4.304 |
gomkl/2021a | GCC/10.3.0 | OpenMPI/4.1.1 | imkl/2021.2.0 |
gcccuda/2019a | GCC/8.3.0 | CUDA/10.1.243 |