diff --git a/docs/index.html b/docs/index.html
index 63d1ab3dade869a1ea49611107a6329f816a561b..c434198afd5084d112a78b9be7dab124945a8920 100644
--- a/docs/index.html
+++ b/docs/index.html
@@ -2210,7 +2210,7 @@ The simulator plugin is embedded into the respective simulations and is responsi
The simulators plugins are designed to be as non-invasive as possible to make integration into new and existing simulations easy.
Simulator plugins are available for <a href="https://www.nest-simulator.org/">NEST</a>, <a href="https://arbor-sim.org/">Arbor</a> and <a href="https://www.thevirtualbrain.org/tvb/zwei">The Virtual Brain</a>.</p>
<p>Additional information can be found on the following poster:<br/></p>
-<center><a href="http://www.google.de"><img src="swagger/figures/poster.png" alt="Markdown Monster icon"
+<center><a href="figures/poster.pdf"><img src="figures/poster.png" alt="Markdown Monster icon"
style="height:400px" /></a></center></div></div></div><div id="section/Installation" data-section-id="section/Installation" class="sc-eDDNvR dwDhuh"><div class="sc-iAEyYk kGYjKt"><div class="sc-hLseeU dpHGXw"><h1 class="sc-fsQiph iunjql"><a class="sc-csCMJt jEUWKP" href="#section/Installation" aria-label="section/Installation"></a>Installation</h1></div></div><div class="sc-hLseeU ldA-dQg"><div class="sc-iKGpAt sc-cjERFW izknwL kIrFoj redoc-markdown "><ol>
<li><a href="#Using-Docker">Using Docker</a></li>
<li><a href="#Building-From-Source">Building From Source</a></li>
@@ -2228,7 +2228,6 @@ While in this case each simulator runs their own simulation, all data can be que
Just save the docker-compose as <code>some-name.yaml</code> and then start Insite with <code>docker-compose -f some-name.yaml up</code>.
Docker will download all four containers and start the simulations.
You can query the data from the examples from the access node via <code>localhost:52056</code> via your favourite tool, e.g.: <code>curl -L localhost:52056/version/</code> to retrieve the version.</p>
-<p>Link to docker-compose file: <a href="http://www.google.de">adsfdsf</a></p>
<pre><code class="language-yaml"><span class="token key atrule">version</span><span class="token punctuation">:</span> <span class="token string">"3"</span>
<span class="token key atrule">services</span><span class="token punctuation">:</span>
@@ -2271,23 +2270,23 @@ These images contain the respective simulator binaries and the <strong>Insite si
</thead>
<tbody><tr>
<td>Arbor</td>
-<td><a href="registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-arbor">Link</a></td>
+<td><a href="https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-arbor">Link</a></td>
</tr>
<tr>
<td>NEST</td>
-<td><a href="registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-nest-module">Link</a></td>
+<td><a href="https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-nest">Link</a></td>
</tr>
<tr>
<td>TVB</td>
-<td><a href="registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-tvb-module">Link</a></td>
+<td><a href="https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-tvb">Link</a></td>
</tr>
<tr>
<td>Access Node</td>
-<td><a href="registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-access-node">Link</a></td>
+<td><a href="https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-access-node">Link</a></td>
</tr>
</tbody></table>
<p>You can use these images to deploy your own Insite-enabled simulations.
-For further information on how to that you can refer to our examples: <a href="https://www.google.de"></a>
+For further information on how to that you can refer to our examples.
<a name="BuildDockerImages"></a></p>
<h3 id="build-docker-images">Build Docker Images</h3>
<p>To build the docker containers yourself you can use the provided Dockerfile in the repository.</p>
@@ -2408,7 +2407,6 @@ insite_multimeter <span class="token operator">=</span> nest<span class="token p
</code></pre>
<p>All neurons connected to Insite devices are available via the Insite pipeline.<br>
Endpoints for spikerecorders and multimeters provide information about Insite-enabled nodes in the network while the spike and multimeter endpoints return data recorded by the devices.</p>
-<p>You can find an example here: <a href="https://www.google.de">NEST Example</a></p>
<p><a name="ArborIntegration"></a></p>
</div></div></div><div id="section/Embedding-Insite-into-Simulations/Arbor-Integration" data-section-id="section/Embedding-Insite-into-Simulations/Arbor-Integration" class="sc-eDDNvR dwDhuh"><div class="sc-iAEyYk kGYjKt"><div class="sc-hLseeU dpHGXw"><h2 class="sc-qRumB xewZN"><a class="sc-csCMJt jEUWKP" href="#section/Embedding-Insite-into-Simulations/Arbor-Integration" aria-label="section/Embedding-Insite-into-Simulations/Arbor-Integration"></a>Arbor Integration</h2></div></div><div class="sc-hLseeU ldA-dQg"><div class="sc-iKGpAt sc-cjERFW izknwL kIrFoj redoc-markdown "><p>The following sections assumes that the Insite nest module was successfully compiled and installed and is available.
Either through using the Arbor insite container described above or by manual compilation.<br>
@@ -2436,8 +2434,7 @@ In the example <code>arb::all_probes</code> enables all present probes to be acc
The <code>sched</code> describes the sampling rate of the Insite-enabled probes.</p>
<p>The Backend provides information about the cells present in the simulation. Additionally, the spikes of all neurons are recorded by default.
Available probes and their data can be queried via the API.</p>
-<p>Please refer to the API documentation below for a complete overview.
-You can find an example here: <a href="https://www.google.de">Arbor Example</a></p>
+<p>Please refer to the API documentation below for a complete overview.</p>
<p><a name="TVBIntegration"></a></p>
</div></div></div><div id="section/Embedding-Insite-into-Simulations/TVB-Integration" data-section-id="section/Embedding-Insite-into-Simulations/TVB-Integration" class="sc-eDDNvR dwDhuh"><div class="sc-iAEyYk kGYjKt"><div class="sc-hLseeU dpHGXw"><h2 class="sc-qRumB xewZN"><a class="sc-csCMJt jEUWKP" href="#section/Embedding-Insite-into-Simulations/TVB-Integration" aria-label="section/Embedding-Insite-into-Simulations/TVB-Integration"></a>TVB Integration</h2></div></div><div class="sc-hLseeU ldA-dQg"><div class="sc-iKGpAt sc-cjERFW izknwL kIrFoj redoc-markdown "><p>The following sections assumes that the Insite TVB module is available.
Either through using the Arbor insite container described above or by manual installation.<br></p>
@@ -2498,7 +2495,6 @@ sim<span class="token punctuation">.</span>configure<span class="token punctuati
insite_ws_manager<span class="token punctuation">.</span>send_end_sim<span class="token punctuation">(</span><span class="token punctuation">)</span>
insite_ws_manager<span class="token punctuation">.</span>close<span class="token punctuation">(</span><span class="token punctuation">)</span>
</code></pre>
-<p>You can find an example here: <a href="https://www.google.de">TVB Example</a></p>
</div></div></div><div id="section/Insite-Access-Node-Configuration" data-section-id="section/Insite-Access-Node-Configuration" class="sc-eDDNvR dwDhuh"><div class="sc-iAEyYk kGYjKt"><div class="sc-hLseeU dpHGXw"><h1 class="sc-fsQiph iunjql"><a class="sc-csCMJt jEUWKP" href="#section/Insite-Access-Node-Configuration" aria-label="section/Insite-Access-Node-Configuration"></a>Insite Access Node Configuration</h1></div></div><div class="sc-hLseeU ldA-dQg"><div class="sc-iKGpAt sc-cjERFW izknwL kIrFoj redoc-markdown "><p>The following settings can be configured on the access node:</p>
<table>
<thead>
@@ -2670,7 +2666,7 @@ websocketPort <span class="token operator">=</span> <span class="token number">9
</div></div><div><h3 class="sc-fJjTeA ePOTpD">Responses</h3><div><button class="sc-hsiEis cWXOzB"><svg class="sc-fbJfA hdZJEv" version="1.1" viewBox="0 0 24 24" x="0" xmlns="http://www.w3.org/2000/svg" y="0" aria-hidden="true"><polygon points="17.3 8.3 12 13.6 6.7 8.3 5.3 9.7 12 16.4 18.7 9.7 "></polygon></svg><strong class="sc-fYaxgZ jSsbkC">200<!-- --> </strong><span class="sc-jegxcv gajQTH"><p>Operation successful.</p>
</span></button></div></div></div><div class="sc-jTrPJq sc-gLDzan dNLRTm kJwgaC"><div class="sc-GJyyB ieQSFy"><button class="sc-eGFuAX ipciJi"><span type="get" class="sc-fnxdBY eA-dinb http-verb get">get</span><span class="sc-jYvNne knPJEw">/version/</span><svg class="sc-fbJfA cKHaCr" style="margin-right:-25px" version="1.1" viewBox="0 0 24 24" x="0" xmlns="http://www.w3.org/2000/svg" y="0" aria-hidden="true"><polygon points="17.3 8.3 12 13.6 6.7 8.3 5.3 9.7 12 16.4 18.7 9.7 "></polygon></svg></button><div aria-hidden="true" class="sc-llcuoN jCkqMH"><div class="sc-jnsZEu fqrYgB"><div class="sc-iKGpAt sc-cjERFW izknwL hmZjfB"></div><div tabindex="0" role="button"><div class="sc-dVCGSn hwfKEI"><span>http://localhost:52056</span>/version/</div></div></div></div></div><div><h3 class="sc-kFuwaP eBbNVn"> <!-- -->Response samples<!-- --> </h3><div class="sc-cyRfQX kNFBHD" data-rttabs="true"><ul class="react-tabs__tab-list" role="tablist"><li class="tab-success react-tabs__tab--selected" role="tab" id="react-tabs-52" aria-selected="true" aria-disabled="false" aria-controls="react-tabs-53" tabindex="0" data-rttab="true">200</li></ul><div class="react-tabs__tab-panel react-tabs__tab-panel--selected" role="tabpanel" id="react-tabs-53" aria-labelledby="react-tabs-52"><div><div class="sc-BKAtq hvYWfY"><span class="sc-cPlDXj jUEjPe">Content type</span><div class="sc-bCDidY fwiSrO">application/json</div></div><div class="sc-jhSXcr jgxXtU"><div class="sc-jMAIzZ ivMQwx"><div class="sc-gjTGSA fwkYoi"><button><div class="sc-cbelXg gWYfxq">Copy</div></button><button> Expand all </button><button> Collapse all </button></div><div class="sc-iKGpAt izknwL sc-dQelHR gJpUug"><div class="redoc-json"><code><button class="collapser" aria-label="collapse"></button><span class="token punctuation">{</span><span class="ellipsis"></span><ul class="obj collapsible"><li><div class="hoverable "><span class="property token string">"api"</span>: <button class="collapser" aria-label="collapse"></button><span class="token punctuation">{</span><span class="ellipsis"></span><ul class="obj collapsible"><li><div class="hoverable collapsed"><span class="property token string">"v1"</span>: <span class="token string">"1.3"</span><span class="token punctuation">,</span></div></li><li><div class="hoverable collapsed"><span class="property token string">"v2"</span>: <span class="token string">"2.1"</span><span class="token punctuation">,</span></div></li><li><div class="hoverable collapsed"><span class="property token string">"v3"</span>: <span class="token string">"3.5"</span></div></li></ul><span class="token punctuation">}</span><span class="token punctuation">,</span></div></li><li><div class="hoverable "><span class="property token string">"insite"</span>: <span class="token string">"4.6"</span></div></li></ul><span class="token punctuation">}</span></code></div></div></div></div></div></div></div></div></div></div></div></div><div class="sc-emEvRq drIpzy"></div></div></div>
<script>
- const __redoc_state = {"menu":{"activeItemIdx":-1},"spec":{"data":{"openapi":"3.0.1","info":{"description":"# Insite - A Pipeline Enabling In-Transit Access for NEST, TVB and Arbor.\nThis project/research has received funding from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the\nSpecific Grant Agreement No. 945539 (Human Brain Project SGA3) and Specific Grant Agreement No. 785907 (Human Brain Project SGA2).\n## Goal \n\nInsite provides a middleware that enables users to acquire data from neural simulators via the in-transit paradigm.\nIn-transit approaches allow users to access data from a running simulation while the simulation is still going on.\nIn the traditional approach data from simulations is written to disk first, and can only be accessed after the simulation has finished.\nHowever, this has two main constraints:\n 1. Data can only be further processed after the whole simulation has finished.\n 2. Disk speed can be a bottleneck when simulating, as data has to be written out.\n 3. Data must be completely stored on the machine, leading to large files.\n\nUsing **Insite** allows users to develop data consumer, such as visualizations and analysis tools that allow **early insight** into the data **without storing data** with virtually **zero dependencies**.\n\n**Insite** was specifically designed to be **ease-to-integrate** and **easy-to-use** to allow a wide range of users to take advantage of in-transit approaches in the context of brain simulatiion.\nInsite uses off-the-shelf dataformats and protocols to make integration as easy as possible.\nData can be queried via an HTTP REST API from Insite's access node, which represents a single point of contact for the user.\n\n## Architecture\nInsite consists of two main layers. \nThe first part is the **Insite access node**, an HTTP server that serves as a centralized endpoints.\n\nThe access node aggregates data from multiple simulators (NEST, Arbor, TVB) and from multiple simulation instances, respectively.\nThis means, that even distributed simulations, e.g. via MPI, can be access as if it is only one simulation instances.\nData is aggregated at the access node and can then be filtered and accessed by the user.\nThus, allowing convienent access to multi-node multiscale simulations.\n\n<center><img src=\"figures/flow.png\" alt=\"Markdown Monster icon\"\nstyle=\"float: center;\"/></center>\n<center>Figure 1: Top level architecture of Insite. Data is collected from simulators and provided via an access node.</center>\n\nThis architecture enables users to easily create in-situ visualizations of neural simulations without the knowledge of the simulation's underlying architecture or any further knowledge about the computational distribution of the simulation.\nUsers can query the HTTP endpoint for different datapoints, such as: spike data, multimeter data, the topology of the neural network and so on (see full API below).\nThe returned data in encoded in JSON, thus allowing processing in a plethora of different languages and systems without Insite specific dependencies.\n\nThe access-node provides the full API to the Insite pipeline which is documented below.\n\nThe second part are **Insite's simulator plugings**. \nThe simulator plugin is embedded into the respective simulations and is responsible for collecting simulation data and making it available to the access node.\nThe simulators plugins are designed to be as non-invasive as possible to make integration into new and existing simulations easy.\nSimulator plugins are available for [NEST](https://www.nest-simulator.org/), [Arbor](https://arbor-sim.org/) and [The Virtual Brain](https://www.thevirtualbrain.org/tvb/zwei).\n\nAdditional information can be found on the following poster:<br/>\n<center><a href=\"http://www.google.de\"><img src=\"swagger/figures/poster.png\" alt=\"Markdown Monster icon\"\nstyle=\"height:400px\" /></a></center>\n\n# Installation \n1. [Using Docker](#Using-Docker)\n2. [Building From Source](#Building-From-Source)\n\n## Using Docker\nTo be able to use the Docker images please make sure that the [docker engine](https://www.docker.com) and [docker compose](https://docs.docker.com/compose/) are installed.<br>\n(Or docker compatible containerization engines)\n\nThere are two different approaches for using Insite with docker:\n1. [Using Pre-built Images](#Using-Pre-built-Images)\n2. [Build Docker Images](#BuildDockerImages)\n\n### Run the example\n\nThe docker-compose below provides an example with all three simulators.\nWhile in this case each simulator runs their own simulation, all data can be queried via the single access-node nonetheless.\nJust save the docker-compose as ```some-name.yaml``` and then start Insite with ```docker-compose -f some-name.yaml up```.\nDocker will download all four containers and start the simulations.\nYou can query the data from the examples from the access node via ```localhost:52056``` via your favourite tool, e.g.: ```curl -L localhost:52056/version/``` to retrieve the version.\n\nLink to docker-compose file: [adsfdsf](http://www.google.de)\n```yaml\nversion: \"3\"\n\nservices:\n insite-access-node:\n image:\n registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-access-node\n ports:\n - \"52056:52056\" # You can change the local part of the port here \n environment:\n INSITE_NEST_BASE_URL: \"insite-nest-module\"\n INSITE_ARBOR_BASE_URL: \"arbor-module\"\n\n nest-example:\n image:\n registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-nest-example\n\n tvb-example: \n image:\n registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-tvb-example\n environment:\n INSITE_ACCESS_NODE_URL: \"insite-access-node\"\n depends_on:\n - insite-access-node\n\n arbor-example: \n image:\n registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-arbor-example\n depends_on:\n - insite-access-node\n```\n\n### Using Pre-built Images\nWe provide pre-built images for NEST, Arbor, TVB and the Insite access node.\nThese images contain the respective simulator binaries and the **Insite simulator module** pre-installed:\n| Container | Link |\n|---|---|\n| Arbor | [Link](registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-arbor) |\n| NEST | [Link](registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-nest-module) |\n| TVB | [Link](registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-tvb-module) |\n| Access Node |[Link](registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-access-node) |\n\nYou can use these images to deploy your own Insite-enabled simulations.\nFor further information on how to that you can refer to our examples: [](https://www.google.de)\n<a name=\"BuildDockerImages\"></a>\n### Build Docker Images\n\nTo build the docker containers yourself you can use the provided Dockerfile in the repository.\n\nDockerfiles are located in the ```docker``` with the following structure:\n```\ndocker\n├── Dockerfile_AccessNode\n├── examples\n│ ├── Dockerfile_ArborRingExample\n│ ├── Dockerfile_NestExample\n│ └── Dockerfile_TVBExample\n└── simulators\n ├── Dockerfile_Arbor\n ├── Dockerfile_NEST\n └── Dockerfile_TVB\n```\n```Dockerfile_AccessNode``` builds Insite's access node.<br>\n```simulators/Dockerfile_*``` builds the respective simulators with Insite simulator modules integrated. <br> \n```examples/Dockerfile_*``` builds the respective examples. They are based on the simulator docker images but add example simulations. <br> \n\nThe Dockerfiles refer to relative locations starting at the repository root. Therefore, to build containers please build from the root and refer to the Dockerfiles, e.g.:\n``` docker build . -f docker/simulators/Dockerfile_Arbor```\n\n## Building From Source\n1. Clone this repository (`git clone https://github.com/VRGroupRWTH/insite.git`).\n\n### Building the Access Node\nThe access node is written in C++ and uses the CMake build system.\nDependencies are downloaded via [CPM](https://github.com/cpm-cmake/CPM.cmake) during configuration.\n\n```bash\ncd access-node\nmkdir build && cd build\ncmake ..\nmake -j insite-access-node\n```\nAccess node dependencies:\n- https://github.com/jbeder/yaml-cpp\n- https://github.com/libcpr/cpr\n- https://github.com/zaphoyd/websocketpp\n- https://github.com/gabime/spdlog\n- https://github.com/google/flatbuffers\n- https://github.com/marzer/tomlplusplus\n- https://github.com/OlivierLDff/asio.cmake\n- https://github.com/TartanLlama/optional\n- https://github.com/Tencent/rapidjson\n- https://github.com/CrowCpp/Crow\n\n### Building the Arbor Module\nThe arbor module is written in C++ and uses the CMake build system.\nDependencies are downloaded via [CPM](https://github.com/cpm-cmake/CPM.cmake) during configuration.\n\n```bash\ncd arbor-module\nmkdir build && cd build\ncmake ..\nmake -j insite-arbor \nmake install\n```\nArbor module dependencies:\n- https://github.com/arbor-sim/arbor\n- https://github.com/gabime/spdlog\n- https://github.com/marzer/tomlplusplus\n- https://github.com/TartanLlama/optional\n- https://github.com/Tencent/rapidjson\n- https://github.com/CrowCpp/Crow\n\n### Building the NEST Module\nThe nest module is written in C++ and uses the CMake build system.\nDependencies are downloaded via [CPM](https://github.com/cpm-cmake/CPM.cmake) during configuration.\nFirst build nest according to the the [nest documentation](https://nest-simulator.readthedocs.io/en/master/installation/index.html), then build against nest.\n\n```bash\ncd nest-module\nmkdir build && cd build\ncmake .. -Dwith-nest=NEST_INSTALL_PATH/bin/nest-config\nmake -j install \n```\nNEST module dependencies:\n- https://github.com/nest/nest-simulator\n- https://github.com/zaphoyd/websocketpp\n- https://github.com/gabime/spdlog\n- https://github.com/google/flatbuffers\n- https://github.com/TartanLlama/optional\n- https://github.com/Tencent/rapidjson\n- https://github.com/CrowCpp/Crow\n\n### Building the TVB module\nThe TVB module is written in Python and involves no compilation process.\nDependencies can be installed via pip:\n```bash\ncd tvb-module\npip install -r requirements.txt\n```\nTvb module dependencies:\n- https://github.com/ijl/orjson\n- https://github.com/numpy/numpy\n\n# Embedding Insite into Simulations\n1. [NEST Integration](#NESTIntegration)\n2. [Arbor Integration](#ArborIntegration)\n3. [TVB Integrations](#TVBIntegration)\n\n<a name=\"NESTIntegration\"></a>\n## NEST Integration\nThe following sections assumes that the Insite nest module was successfully compiled and installed and is available.\nEither through using the NEST insite container described above or by manual compilation.<br>\nInsite can be integrated into NEST simulation via NEST's Python API.\nA NEST simulation can be in-transit enabled by adding Insite recording backends into the simulation after activating Insite with:\n```python\nnest.Install(\"insitemodule\")\n```\nAfterwards, a new spike recorder or multimeter can be created with:\n```Python\n# Create spike recorder\ninsite_spike_recorder = nest.Create(\"spike_recorder\")\n\n#Create multimeter\ninsite_multimeter = nest.Create(\"multimeter\")\n```\n\nTo enable recording to Insite the spikerecorder and multimeter have to be set to the correct recording backend with:\n```python\nnest.SetStatus(YOUR_DEVICE, [{\"record_to\":\"insite\"}])\n```\nrespectively.\n\nThe recording devices act as normal NEST nodes and can be connected to other nodes, e.g., neurons:\n```python\nnest.Connect(nodes_ex, insite_spike_recorder, syn_spec=\"excitatory\")\n```\n\nAll neurons connected to Insite devices are available via the Insite pipeline.<br>\nEndpoints for spikerecorders and multimeters provide information about Insite-enabled nodes in the network while the spike and multimeter endpoints return data recorded by the devices.\n\nYou can find an example here: [NEST Example](https://www.google.de)\n\n\n<a name=\"ArborIntegration\"></a>\n## Arbor Integration\nThe following sections assumes that the Insite nest module was successfully compiled and installed and is available.\nEither through using the Arbor insite container described above or by manual compilation.<br>\nInsite can be embedded into Arbor simulations via the Insite arbor C++ module.\nTherefore, arbor simulations using Insite must link against insite-arbor in their CMakeLists. E.g.: \n```cmake\ntarget_link_libraries(YOUR_SIMULATION PUBLIC insite-arbor)\n```\n\nAfterwards, the simulation can be made Insite-enabled by embedding the Insite pipeline backend into your simulation file.<br>\nFirst include the pipeline backend:\n```cpp\n#include <insite/arbor/pipeline_backend.h>\n```\nNext, add an Insite HTTP backend in your main code before running the simulation:\n```\n insite::HttpBackend insite_backend(context, recipe, sim, arb::all_probes,\n arb::regular_schedule(1.0));\n```\nThe signature is as follows:\n``` cpp\nHttpBackend(const arb::context& ctx,\n const arb::recipe& rcp,\n arb::simulation& sim,\n arb::cell_member_predicate cell_pred,\n arb::schedule sched);\n```\nThe ```cell_member_predicate``` can be used to filter the probes that should be made available via Insite.\nIn the example ```arb::all_probes``` enables all present probes to be accessed via Insite.\nThe ```sched``` describes the sampling rate of the Insite-enabled probes.\n\nThe Backend provides information about the cells present in the simulation. Additionally, the spikes of all neurons are recorded by default.\nAvailable probes and their data can be queried via the API.\n\nPlease refer to the API documentation below for a complete overview.\nYou can find an example here: [Arbor Example](https://www.google.de)\n\n<a name=\"TVBIntegration\"></a>\n## TVB Integration\nThe following sections assumes that the Insite TVB module is available.\nEither through using the Arbor insite container described above or by manual installation.<br>\n\nFirst import the Python TVB modules:\n```Python\nfrom insite_websocketmanager import InsiteWebSocketManager, InsiteOpcode\nfrom insite_monitor_wrapper import InsiteMonitorWrapper\n```\n\nafterwards initialize the ```InsiteWebSocketManager```:\n```Python\ninsite_ws_manager = WebSocketManager(INSITE_ACCESS_NODE_URL,9011)\n```\nthe access node url.\n\nTo record data to Insite regular monitors have to be wrapped via the InsiteMonitorWrapper:\n```Python\nmon_raw = monitors.Raw()\nmon_spat = monitors.SpatialAverage()\ninsite_spatial = MonitorWrapper(mon_spat,insite_ws_manager)\ninsite_raw = MonitorWrapper(mon_raw,insite_ws_manager)\n```\n\nMonitors can be configured as usual before calling the MonitorWrapper.\nAll wrapped monitors that are registered as monitors at the simulation will be will be available via Insite pipeline.\n\n```Python\nwhat_to_watch = [insite_raw, insite_spatial]\nsim = simulator.Simulator(model = oscilator, connectivity = white_matter,\n coupling = white_matter_coupling, \n integrator = heunint, monitors = what_to_watch)\n```\n\nBefore starting the simulation ```connect()``` and the ```send_start_sim()``` function must be called.\n```send_sim_info(sim)``` must be called before ```configure``` is called on the simulation.\nAfter the simulation ```send_end_sim()``` must be called.\nFinally, the connection can be close via the ```close()``` call.\n\nThe following code shows the complete boilerplate code for wrapping a TVB simulation:\n```Python\n\ninsite_ws_manager = WebSocketManager(address,9011)\n\ninsite_ws_manager.connect()\n\nmon_raw = monitors.Raw()\nmon_spat = monitors.SpatialAverage()\ninsite_spatial = MonitorWrapper(mon_spat,insite_ws_manager)\ninsite_raw = MonitorWrapper(mon_raw,insite_ws_manager)\n\nlength = 500\nwhat_to_watch = [insite_spatial]\n\n[simulation settings...]\n\n\ninsite_ws_manager.send_start_sim()\n\nsim = simulator.Simulator(model = oscilator, connectivity = white_matter,\n coupling = white_matter_coupling, \n integrator = heunint, monitors = what_to_watch)\n\ninsite_ws_manager.send_sim_info(sim)\nsim.configure()\n\nfor data in sim(simulation_length=length):\n pass\n\ninsite_ws_manager.send_end_sim()\ninsite_ws_manager.close()\n```\nYou can find an example here: [TVB Example](https://www.google.de)\n\n# Insite Access Node Configuration\nThe following settings can be configured on the access node:\n| Description | config key | env var |\n|---|---|---|\n| \\#NEST Nodes | numberOfNodes | INSITE_NEST_NUM_NODES |\n| URL of NEST Simulator | baseUrl | INSITE_NEST_BASE_URL |\n| \\#Arbor Nodes | numberOfNodes | INSITE_ARBOR_NUM_NODES|\n| URL of Arbor Simulator | baseUrl | INSITE_ARBOR_BASE_URL |\n| Access Node API Port | port | INSITE_ACCESS_NODE_PORT |\n| Access Node Websocket Port (TVB Port) | websocketPort | INSITE_ACCESS_NODE_WSPORT |\n\nValues can be provided by settings the corresponding environment variable or via TOML or YAML in a config.{toml,yaml} file via the same directory as the binary.<br>\nToml example: <br>\n```toml\n[\"nest\"]\nnumberOfNodes = 2\nbaseUrl = \"insite-nest-example\"\n\n[\"arbor\"]\nnumberOfNodes = 1\nbaseUrl = \"insite-arbor-example\"\n\n[\"accessNode\"]\nport = 52056\nwebsocketPort = 9011\n```\n\nYaml example: <br>\n```yaml\nnest:\n numberOfNodes: 2\n baseUrl: \"insite-nest-example\"\narbor:\n numberOfNodes: 1\n baseUrl: \"insite-arbor-example\"\naccessNode:\n port: 52056\n websocketPort: 9011\n```\n","title":"Insite - In-Situ Pipeline REST API","version":"2.1.0"},"servers":[{"url":"http://localhost:52056/"}],"x-tagGroups":[{"name":"Insite API","tags":["TVB","Arbor","Nest","General"]}],"paths":{"/tvb/monitors/":{"get":{"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/TvbMonitors"}}},"description":"Operation successful."}},"description":"Returns monitors in the TVB instance that are connected to Insite and available to fetch data from.","summary":"Monitors","tags":["TVB"]}},"/tvb/monitorData/":{"get":{"parameters":[{"$ref":"#/components/parameters/gIdParameter"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/TvbMonitorData"}}},"description":"Operation successful."}},"description":"Returns recorded data from the monitors in the TVB instance that are connected to Insite and available to fetch data from.","summary":"Monitor Data","tags":["TVB"]}},"/tvb/simulationInfo/":{"get":{"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/TvbSimulationInfo"}}},"description":"Operation successful."}},"description":"Returns the simulation properties of the TVB instance connected to the the Insite instance. Returned values can be inspected further with the /simulation_info/<property> endpoint.","summary":"Simulation Properties","tags":["TVB"]}},"/tvb/simulationInfo/{property}":{"get":{"operationId":"nest_get_spikes_by_spikerecorder","parameters":[{"description":"Name of a property returned by /simulation_info or /simulation_info/other_prorperty.","explode":false,"in":"path","name":"property","required":true,"style":"simple"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/TvbSimulationInfoConnectivity"}}},"description":"Operation successful."}},"description":"Returns the simulation subproperties of the TVB instance connected to the the Insite instance. Returned values can be inspected further with the /simulation_info/<property>/<property>... endpoint.","summary":"Subproperties of Simulation Properties","tags":["TVB"]}},"/arbor/probes/":{"get":{"parameters":[{"$ref":"#/components/parameters/gIdParameter"},{"$ref":"#/components/parameters/lIdParameter"},{"$ref":"#/components/parameters/pIdParameter"},{"$ref":"#/components/parameters/uIdParameter"},{"$ref":"#/components/parameters/hashParameter"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ArborProbes"}}},"description":"Operation successful."}},"description":"Returns all probes that are present in the simulation and are connected to the Insite instance.","summary":"Simulation Probes","tags":["Arbor"]}},"/arbor/probeData/":{"get":{"parameters":[{"$ref":"#/components/parameters/gIdParameter"},{"$ref":"#/components/parameters/lIdParameter"},{"$ref":"#/components/parameters/pIdParameter"},{"$ref":"#/components/parameters/uIdParameter"},{"$ref":"#/components/parameters/hashParameter"},{"$ref":"#/components/parameters/fromTimeParameter"},{"$ref":"#/components/parameters/toTimehParameter"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ArborProbeData"}}},"description":"Operation successful."}},"description":"Returns data from the probes that are present in the simulation and are connected to the Insite instance.","summary":"Probe Data","tags":["Arbor"]}},"/arbor/spikes/":{"get":{"parameters":[{"$ref":"#/components/parameters/fromTimeParameter"},{"$ref":"#/components/parameters/toTimeParameter"},{"$ref":"#/components/parameters/gIdParameter"},{"$ref":"#/components/parameters/skipParameter"},{"$ref":"#/components/parameters/topParameter"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ArborSpikes"}}},"description":"Operation successful."}},"description":"Returns spikes that occured in the simulation.","summary":"Spikes","tags":["Arbor"]}},"/arbor/cells/":{"get":{"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ArborCells"}}},"description":"Operation successful."}},"description":"Returns the cells and their properties that are present in the connected Arbor simulation.","summary":"Cells","tags":["Arbor"]}},"/arbor/cellInfos/":{"get":{"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ArborCellInfos"}}},"description":"Operation successful."}},"description":"Returns an overview of the cells present in the simulation.","summary":"Cell Infos","tags":["Arbor"]}},"/nest/kernelStatus/":{"get":{"operationId":"nest_get_kernel_status","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/NestKernelStatus"},"type":"array"}}},"description":"Operation successful."}},"description":"Retrieves the current status of the NEST kernel.","summary":"Kernel Status","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/multimeters/":{"get":{"operationId":"nest_get_multimeters","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/MultimeterInfo"},"type":"array"}}},"description":"Operation successful."}},"summary":"Multimeters","description":"Retrieves a list with information about all available multimeters and their properties. Additionally, the ids of the nodes that are connected to the multimeter are returned.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/multimeters/{multimeterId}/":{"get":{"operationId":"nest_get_multimeter_by_id","parameters":[{"description":"The identifier of the multimeter.","explode":false,"in":"path","name":"multimeterId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/MultimeterInfo"}}},"description":"Operation successful."}},"summary":"Multimeter Properties","description":"Retrieves information about a specific multimeter that and its properties.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/multimeters/{multimeterId}/attributes/{attributeName}/":{"get":{"operationId":"nest_get_multimeter_measurements","parameters":[{"description":"The multimeter to query","explode":false,"in":"path","name":"multimeterId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"},{"description":"The attribute to query (e.g., 'V_m' for the membrane potential)","explode":false,"in":"path","name":"attributeName","required":true,"schema":{"type":"string"},"style":"simple"},{"description":"The start time (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The end time (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"A list of node IDs queried for attribute data.","explode":false,"in":"query","name":"nodeIds","required":false,"schema":{"items":{"format":"uint64","type":"integer"},"type":"array"},"style":"form"},{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},{"description":"The maximum number of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/MultimeterMeasurement"}}},"description":"Operation successful."}},"summary":"Mutlimeter Measurements By MultimeterId","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodeCollections/":{"get":{"operationId":"nest_get_node_collections","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/NestNodeCollectionProperties"},"type":"array"}}},"description":"Operation successful."}},"summary":"Node Collections","description":"Retrieves an list of all node collections. Returned are the node collection IDs, which nodes are part of the collection and which model is used by the collection.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodeCollections/{nodeCollectionId}/nodes/":{"get":{"operationId":"nest_get_nodes_by_node_collection","parameters":[{"description":"The identifier of the node collection","explode":false,"in":"path","name":"nodeCollectionId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"}],"responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/NestNodeProperties"},"type":"array"}}},"description":"Operation successful."}},"description":"Retrieves the list of all nodes within the specified node collection.","summary":"Nodes In Node Collection","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodeCollections/{nodeCollectionId}/nodes/ids/":{"get":{"operationId":"nest_get_node_ids_by_node_collection","parameters":[{"description":"The identifier of the node collection","explode":false,"in":"path","name":"nodeCollectionId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"}],"responses":{"200":{"content":{"application/json":{"schema":{"example":[1,2],"items":{"format":"uint64","type":"integer"},"type":"array"}}},"description":"Operation successful."}},"description":"Retrieves the list of all node ids within the node collection.","summary":"Node Ids In Node Collection","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodeCollections/{nodeCollectionId}/spikes/":{"get":{"operationId":"nest_get_spikes_by_node_collection","parameters":[{"description":"The identifier of the node collection.","explode":false,"in":"path","name":"nodeCollectionId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"},{"description":"The start time (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The end time (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},{"description":"The maximum numbers of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Spikes"}}},"description":"Operation successful."}},"summary":"Spikes By Node Collection ID","description":"Retrieves the spikes for the given simulation steps (optional) and node collection. This request merges the spikes recorded by all spike detectors and removes duplicates.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodes/":{"get":{"operationId":"nest_get_nodes","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/NestNodeProperties"},"type":"array"}}},"description":"Operation successful."}},"summary":"Nodes","description":"Retrieves all nodes that are part of the simulation.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodes/ids/":{"get":{"operationId":"nest_get_node_ids","responses":{"200":{"content":{"application/json":{"schema":{"example":[1,2,3,4],"items":{"format":"uint64","type":"integer"},"type":"array"}}},"description":"Operation successful."}},"description":"Retrieves a list with the IDs of all node that are part of the simulation.","summary":"Node Ids","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodes/{nodeId}/":{"get":{"operationId":"nest_get_node_by_id","parameters":[{"description":"The ID of the queried node.","explode":false,"in":"path","name":"nodeId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NestNodeProperties"}}},"description":"Operation successful."}},"summary":"Node Properties By Node ID","description":"Retrieves the properties of the specified node.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/simulationTimeInfo/":{"get":{"operationId":"nest_get_simulation_time_info","responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/SimulationTimeInfo"}}},"description":"Operation successful."}},"summary":"Simulation Time Info","description":"Retrieves simulation time information (stepSize, begin, current, end).","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/spikerecorders/":{"get":{"operationId":"nest_get_spikerecorders","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/SpikedetectorInfo"},"type":"array"}}},"description":"Operation successful."}},"summary":"Spike Recorders","description":"Queries all spike recorders that are available via the pipeline.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/spikedetectors/":{"get":{"deprecated":true,"operationId":"nest_get_spikedetectors","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/SpikedetectorInfo"},"type":"array"}}},"description":"Operation successful."}},"summary":"Spike Detectors","description":"DEPRECATED: USE /nest/spikerecorders INSTEAD.<br> Queries all spike detectors that are available via the pipeline.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/spikerecorders/{spikerecorderId}/spikes/":{"get":{"operationId":"nest_get_spikes_by_spikerecorder","parameters":[{"description":"The ID of the spike detector to query.","explode":false,"in":"path","name":"spikerecorderId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"},{"description":"The start time in milliseconds (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The end time in milliseconds (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"A list of node IDs queried for spike data.","explode":false,"in":"query","name":"nodeIds","required":false,"schema":{"items":{"format":"uint64","type":"integer"},"type":"array"},"style":"form"},{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},{"description":"The maximum number of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Spikes"}}},"description":"Operation successful."}},"summary":"Spikes By Spike Recorder Id","description":"Retrieves the spikes for the given time range (optional) and node IDs (optional) from one spike recorder. If no time range or node list is specified, it will return the spikes for whole time or all nodes respectively.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/spikedetectors/{spikedetectorId}/spikes/":{"get":{"deprecated":true,"operationId":"nest_get_spikes_by_spikedetector","parameters":[{"description":"The ID of the spike detector to query.","explode":false,"in":"path","name":"spikedetectorId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"},{"description":"The start time in milliseconds (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The end time in milliseconds (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"A list of node IDs queried for spike data.","explode":false,"in":"query","name":"nodeIds","required":false,"schema":{"items":{"format":"uint64","type":"integer"},"type":"array"},"style":"form"},{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},{"description":"The maximum number of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Spikes"}}},"description":"Operation successful."}},"summary":"Spikes By Spikedetector Id","description":"Retrieves the spikes for the given time range (optional) and node IDs (optional) from one spike detector. If no time range or node list is specified, it will return the spikes for whole time or all nodes respectively.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/spikes/":{"get":{"operationId":"nest_get_spikes","parameters":[{"description":"The start time in milliseconds (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The end time in milliseconds (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"A list of node IDs queried for spike data.","explode":false,"in":"query","name":"nodeIds","required":false,"schema":{"items":{"format":"uint64","type":"integer"},"type":"array"},"style":"form"},{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},{"description":"The maximum number of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Spikes"}}},"description":"Operation successful."}},"summary":"Spikes","description":"Retrieves the spikes for the given time range (optional) and node IDs (optional). If no time range or node list is specified, it will return the spikes for whole time or all nodes respectively. This request merges the spikes recorded by all spike detectors and removes duplicates.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/version/":{"get":{"operationId":"get_version","responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Version"}}},"description":"Operation successful."}},"summary":"Versions","description":"Returns the deployed insite and API versions.","tags":["General"],"x-swagger-router-controller":"access_node.controllers.version_controller","x-openapi-router-controller":"access_node.controllers.version_controller"}}},"components":{"schemas":{"Version":{"example":{"api":{"v1":"1.3","v2":"2.1","v3":"3.5"},"insite":"4.6"},"properties":{"api":{"type":"string"},"insite":{"type":"string"}},"required":["api","insite"],"type":"object"},"ErrorResponse":{"properties":{"error":{"$ref":"#/components/schemas/Error"}},"required":["error"],"type":"object"},"Error":{"properties":{"code":{"description":"One of the error codes defined here: [...]","type":"string"},"message":{"description":"A human-readable representation of the error.","type":"string"},"innererror":{"$ref":"#/components/schemas/InnerError"}},"required":["code","message"],"type":"object"},"InnerError":{"properties":{"code":{"description":"One of the error codes defined here: [...]","type":"string"},"innererror":{"$ref":"#/components/schemas/InnerError"}},"required":["code"],"type":"object"},"Spikes":{"example":{"simulationTimes":[0.8,0.9],"nodeIds":[1,2],"lastFrame":false},"properties":{"simulationTimes":{"description":"Array of times where a spike occured. This array is always sorted.","items":{"format":"double","type":"number"},"type":"array"},"nodeIds":{"description":"Array of nodeIds that spiked. This array is sorted according to the spike times.","items":{"format":"uint64","type":"integer"},"type":"array"},"lastFrame":{"description":"Indicates if this frame includes the last spike of the finished simulation.","type":"boolean"}},"type":"object"},"MultimeterMeasurement":{"example":{"simulationTimes":[0.1,0.2],"nodeIds":[1,2,3],"values":[0.123,0.123,0.123,0.123,0.123,0.123]},"properties":{"simulationTimes":{"description":"This array is always sorted.","items":{"format":"double","type":"number"},"type":"array"},"nodeIds":{"items":{"format":"uint64","type":"integer"},"type":"array"},"values":{"description":"This array contains the measured values for each node ID and time to get the value for node ID n at time t you have to use the index n * length(simulationTimes) + t","items":{"type":"number"},"type":"array"}},"type":"object"},"NestNodeProperties":{"example":{"nodeId":1,"nodeCollectionId":0,"simulationNodeId":0,"position":[0.1,0.2],"model":"iaf_psc_delta","status":{"C_m":1,"Ca":0,"E_L":0,"I_e":0,"V_m":0,"V_min":-1.7976931348623157e+308,"V_reset":0,"V_th":20,"archiver_length":0,"beta_Ca":0.001}},"properties":{"nodeId":{"format":"uint64","type":"integer"},"nodeCollectionId":{"format":"uint64","type":"integer"},"model":{"type":"string"},"status":{"type":"object"},"position":{"items":{"type":"number"},"type":"array"}},"type":"object"},"NestNodeCollectionProperties":{"example":{"nodeCollectionId":0,"nodes":{"firstId":1,"lastId":100,"count":100},"model":{"name":"iaf_psc_delta","status":{"C_m":"1,","Ca":"0,","E_L":"0,","I_e":"0,","V_m":"0,","V_min":"-1.7976931348623157e+308,","V_reset":"0,","V_th":"20,"}}},"properties":{"nodeCollectionId":{"format":"uint64","type":"integer"},"nodes":{"$ref":"#/components/schemas/NestNodeCollectionNodes"},"model":{"$ref":"#/components/schemas/NestNodeModel"}},"type":"object"},"NestNodeModel":{"example":{"name":"iaf_psc_delta","status":{"C_m":"1,","Ca":"0,","E_L":"0,","I_e":"0,","V_m":"0,","V_min":"-1.7976931348623157e+308,","V_reset":"0,","V_th":"20,"}},"properties":{"name":{"type":"string"},"status":{"type":"object"}},"type":"object"},"NestNodeCollectionNodes":{"example":{"firstId":1,"lastId":100,"count":100},"properties":{"firstId":{"format":"uint64","type":"integer"},"lastId":{"format":"uint64","type":"integer"},"count":{"format":"uint64","type":"integer"}}},"SimulationTimeInfo":{"example":{"stepSize":0.1,"current":2.1,"begin":0.1,"end":4.5},"properties":{"stepSize":{"format":"double","type":"number"},"begin":{"format":"double","type":"number"},"end":{"format":"double","type":"number"},"current":{"format":"double","type":"number"}},"type":"object"},"MultimeterInfo":{"example":{"multimeterId":10,"attributes":["V_m"],"nodeIds":[1,3,5]},"properties":{"multimeterId":{"format":"uint64","type":"integer"},"attributes":{"items":{"type":"string"},"type":"array"},"nodeIds":{"items":{"format":"uint64","type":"integer"},"type":"array"}},"type":"object"},"SpikedetectorInfo":{"example":{"spikedetectorId":0,"nodeIds":[1,3,5]},"properties":{"spikedetectorId":{"format":"uint64","type":"integer"},"nodeIds":{"description":"These are the nodes connected to the spike detector.","items":{"format":"uint64","type":"integer"},"type":"array"}},"type":"object"},"ArborProbes":{"example":{"probes":[{"cell_gid":2,"cell_lid":1,"source_index":0,"probe_kind":"cable_probe_axial_current","hash":4294967298,"probe_global_index":11,"location":[0,0.5]},{"cell_gid":2,"cell_lid":0,"source_index":2,"probe_kind":"cable_probe_membrane_voltage","hash":562949953421314,"probe_global_index":10,"location":[0,0.3]}]}},"NestKernelStatus":{"type":"object","example":{"T_max":1152921504606846.8,"T_min":-1152921504606846.8,"adaptive_spike_buffers":true,"adaptive_target_buffers":true,"buffer_size_secondary_events":0,"buffer_size_spike_data":42,"buffer_size_target_data":125,"data_path":"","data_prefix":"","dict_miss_is_error":true,"grng_seed":0,"growth_factor_buffer_spike_data":1.5,"growth_factor_buffer_target_data":1.5,"keep_source_table":true,"local_num_threads":1,"local_spike_counter":745,"max_buffer_size_spike_data":8388608,"max_buffer_size_target_data":16777216,"max_delay":1.5,"max_num_syn_models":512,"min_delay":1.5,"ms_per_tic":0.001,"network_size":128,"num_connections":1750,"num_processes":1,"off_grid_spiking":false,"overwrite_files":true,"print_time":false,"recording_backends":{"ascii":{},"insite":{},"memory":{},"screen":{}},"resolution":0.1,"rng_seeds":[1],"sort_connections_by_source":true,"structural_plasticity_synapses":{},"structural_plasticity_update_interval":10000,"tics_per_ms":1000,"tics_per_step":100,"time":100,"time_collocate":0,"time_communicate":0,"to_do":0,"total_num_virtual_procs":1,"use_wfr":true,"wfr_comm_interval":1,"wfr_interpolation_order":3,"wfr_max_iterations":15,"wfr_tol":0.0001}},"TvbSimulationInfoConnectivity":{"example":{"Number of regions":76,"Number of connections":1560,"Undirected":false,"areas":" [min, median, max] = [0, 2580.89, 10338.2] dtype = float64 shape = (76,)","weights":" [min, median, max] = [0, 0, 3] dtype = float64 shape = (76, 76)","weights-non-zero":" [min, median, max] = [0.00462632, 2, 3] dtype = float64 shape = (1560,)","tract_lengths":" [min, median, max] = [0, 71.6635, 153.486] dtype = float64 shape = (76, 76)","tract_lengths-non-zero":" [min, median, max] = [4.93328, 74.0646, 153.486] dtype = float64 shape = (5402,)","tract_lengths (connections)":" [min, median, max] = [0, 55.8574, 138.454] dtype = float64 shape = (1560,)"}},"TvbSimulationInfo":{"example":{"Type":"Simulator","title":"Simulator gid: e0f27575-bc8c-4444-a298-0bd7a272ac43","connectivity":"Connectivity gid: de59731a-f13f-4103-a2d5-9182eb4ba213","conduction_speed":"3.0","coupling":"Linear gid: 520ba213-dee2-41c8-972d-95ffc71f6d38","surface":"None","stimulus":"None","model":"Generic2dOscillator gid: de979767-c3fb-4072-a8a0-5ff096b5ef21","integrator":"HeunDeterministic gid: 71890b28-7f4e-4cfa-a45c-ecb7ba92ef1a","initial_conditions":"None","monitors":"[<monitor_wrapper.MonitorWrapper object at 0x7fc7c94b5210>]","simulation_length":"1000.0","gid":"UUID('e0f27575-bc8c-4444-a298-0bd7a272ac43')"}},"ArborProbeData":{"example":{"probeData":[{"gid":2,"lid":1,"pid":0,"size":1000,"time":[0,0.9750000000000004,1.999999999999997,2.9999999999999933,3.99999999999999],"data":[-1.1013412404281553e-13,0.014220165459628968,0.012908425336631052,0.012920058448978668,0.013377748739968996]},{"gid":2,"lid":0,"pid":2,"size":1000,"time":[0,0.9750000000000004,1.999999999999997,2.9999999999999933,3.99999999999999],"data":[-65,-67.31833822951484,-68.46917744645607,-68.89870365000968,-69.03936729932849,-69.06695156902677]}]}},"ArborCells":{"example":{"cells":[{"gid":0,"cell_kind":"cable","cell_description":{"morphology":{"branches":[["(morphology\n ((4294967295 ((segment 0 (point 0 0 -6.30785 6.30785) (point 0 0 6.30785 6.30785) 1)))\n (0 ((segment 1 (point 0 0 6.30785 6.30785) (point 0 0 16.3079 0.5) 3)"]]},"label":{"regions":[{"name":"dend","region":"(tag 3)"},{"name":"soma","region":"(tag 1)"}],"locset":[]},"decor":{"painting":[{"region":"(region \"soma\")","paintable":{"type":"density","value":"hh"}},{"region":"(region \"dend\")","paintable":{"type":"density","value":"pas"}}],"placement":[{"region":"(location 0 0)","placeable":{"label":"detector","type":"threshold_detector"}},{"region":"(location 0 0.5)","placeable":{"label":"primary_syn","type":"synapse"},"value":"expsyn"}]}}}]},"type":"object"},"ArborCellInfos":{"example":{"CellInfos":[{"gid":0,"cell_kind":"cable","num_branches":19,"num_segments":231},{"gid":1,"cell_kind":"cable","num_branches":13,"num_segments":174},{"gid":2,"cell_kind":"cable","num_branches":19,"num_segments":216}]}},"TvbMonitors":{"example":[{"uid":"467bd4ff-3625-4440-9b3a-e7395cab5cc7","internalId":0,"type":"SpatialAverage","observedVariables":["V","W","V + W"]}]},"TvbMonitorData":{"example":[{"uid":"467bd4ff-3625-4440-9b3a-e7395cab5cc7","timesteps":[{"time":499.0234375,"V":[-0.19128321122285258],"W":[-0.08729334745723864],"V + W":[-0.2785765586800911]},{"time":500,"V":[-0.19128247282170338],"W":[-0.0872909920743438],"V + W":[-0.2785734648960471]}]}]},"ArborSpikes":{"example":{"simulationTimes":[0.8,0.9],"gIds":[1,2]},"properties":{"simulationTimes":{"description":"Array of times where a spike occured. This array is always sorted.","items":{"format":"double","type":"number"},"type":"array"},"nodeIds":{"description":"Array of nodeIds that spiked. This array is sorted according to the spike times.","items":{"format":"uint64","type":"integer"},"type":"array"}},"type":"object"}},"parameters":{"fromTimeParameter":{"description":"The start time in milliseconds (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},"toTimeParameter":{"description":"The end time in milliseconds (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},"nodeIdParameter":{"description":"A list of node IDs queried for spike data.","explode":false,"in":"query","name":"nodeIds","required":false,"schema":{"items":{"format":"uint64","type":"integer"},"type":"array"},"style":"form"},"skipParameter":{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"topParameter":{"description":"The maximum number of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"gIdParameter":{"description":"One or more gIds that should be filtered for.","explode":true,"in":"query","name":"gId","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"lIdParameter":{"description":"One or more lIds that should be filtered for.","explode":true,"in":"query","name":"lId","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"pIdParameter":{"description":"One or more pIds that should be filtered for.","explode":true,"in":"query","name":"pId","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"uIdParameter":{"description":"One or more uIds that should be filtered for.","explode":true,"in":"query","name":"uId","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"hashParameter":{"description":"One or more probe hashes that should be filtered for.","explode":true,"in":"query","name":"hash","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}}}}},"searchIndex":{"store":["section/Insite-A-Pipeline-Enabling-In-Transit-Access-for-NEST-TVB-and-Arbor.","section/Insite-A-Pipeline-Enabling-In-Transit-Access-for-NEST-TVB-and-Arbor./Goal","section/Insite-A-Pipeline-Enabling-In-Transit-Access-for-NEST-TVB-and-Arbor./Architecture","section/Installation","section/Installation/Using-Docker","section/Installation/Building-From-Source","section/Embedding-Insite-into-Simulations","section/Embedding-Insite-into-Simulations/NEST-Integration","section/Embedding-Insite-into-Simulations/Arbor-Integration","section/Embedding-Insite-into-Simulations/TVB-Integration","section/Insite-Access-Node-Configuration","tag/TVB","tag/TVB/paths/~1tvb~1monitors~1/get","tag/TVB/paths/~1tvb~1monitorData~1/get","tag/TVB/paths/~1tvb~1simulationInfo~1/get","tag/TVB/operation/nest_get_spikes_by_spikerecorder","tag/Arbor","tag/Arbor/paths/~1arbor~1probes~1/get","tag/Arbor/paths/~1arbor~1probeData~1/get","tag/Arbor/paths/~1arbor~1spikes~1/get","tag/Arbor/paths/~1arbor~1cells~1/get","tag/Arbor/paths/~1arbor~1cellInfos~1/get","tag/Nest","tag/Nest/operation/nest_get_kernel_status","tag/Nest/operation/nest_get_multimeters","tag/Nest/operation/nest_get_multimeter_by_id","tag/Nest/operation/nest_get_multimeter_measurements","tag/Nest/operation/nest_get_node_collections","tag/Nest/operation/nest_get_nodes_by_node_collection","tag/Nest/operation/nest_get_node_ids_by_node_collection","tag/Nest/operation/nest_get_spikes_by_node_collection","tag/Nest/operation/nest_get_nodes","tag/Nest/operation/nest_get_node_ids","tag/Nest/operation/nest_get_node_by_id","tag/Nest/operation/nest_get_simulation_time_info","tag/Nest/operation/nest_get_spikerecorders","tag/Nest/operation/nest_get_spikedetectors","tag/Nest/operation/nest_get_spikes_by_spikerecorder","tag/Nest/operation/nest_get_spikes_by_spikedetector","tag/Nest/operation/nest_get_spikes","tag/General","tag/General/operation/get_version"],"index":{"version":"2.3.9","fields":["title","description"],"fieldVectors":[["title/0",[0,0.425,1,0.775,2,0.838,3,0.912,4,1.113,5,0.67,6,0.585,7,0.514,8,0.585]],["description/0",[9,3.833,10,3.833,11,3.833,12,3.833,13,3.833,14,3.833,15,3.833,16,3.833,17,3.833,18,3.833,19,3.833,20,3.833,21,3.394,22,5.046,23,5.046,24,3.833,25,5.046,26,4.278,27,5.046,28,3.833,29,3.833,30,3.833]],["title/1",[31,4.326]],["description/1",[0,1.211,3,1.142,4,2.778,5,1.672,21,1.254,26,1.58,32,1.05,33,1.864,34,3.931,35,1.864,36,2.239,37,1.58,38,0.934,39,1.251,40,1.864,41,3.15,42,3.597,43,1.394,44,1.864,45,1.864,46,1.864,47,2.524,48,2.977,49,1.142,50,2.977,51,1.394,52,1.394,53,1.864,54,0.97,55,1.142,56,1.394,57,1.254,58,1.142,59,1.864,60,1.864,61,1.864,62,1.394,63,1.394,64,2.977,65,1.864,66,1.864,67,1.864,68,1.394,69,1.251,70,1.864,71,1.864,72,1.58,73,1.58,74,1.864,75,1.58,76,1.864,77,1.864,78,1.58,79,1.58,80,1.864,81,1.394,82,1.58,83,1.864,84,1.864,85,1.864,86,1.254,87,1.864,88,1.864,89,1.864,90,1.864,91,1.864,92,1.864,93,1.864,94,1.254,95,0.901,96,1.58,97,1.58,98,1.05,99,1.394,100,1.864,101,1.05,102,1.394,103,0.269,104,1.864,105,1.58,106,1.864,107,1.864]],["title/2",[108,3.668]],["description/2",[0,1.125,2,0.774,3,0.843,5,2.149,6,0.54,7,0.475,8,0.54,21,0.925,32,1.305,34,2.548,36,1.787,37,1.966,38,1.029,39,0.974,42,1.966,49,0.843,51,1.028,52,1.028,54,0.716,55,0.843,56,1.028,72,1.166,73,1.166,78,1.966,79,1.166,81,1.028,82,1.166,94,1.559,95,0.664,96,1.166,97,1.166,98,0.774,99,1.733,101,1.305,102,1.028,103,0.509,108,2.548,109,1.375,110,1.375,111,1.421,112,1.375,113,1.375,114,1.375,115,1.559,116,2.319,117,2.319,118,1.207,119,1.305,120,1.375,121,1.375,122,2.319,123,0.925,124,1.375,125,1.028,126,1.166,127,2.319,128,1.375,129,1.375,130,1.375,131,1.375,132,1.375,133,2.319,134,2.319,135,2.319,136,1.375,137,1.375,138,1.375,139,1.375,140,1.375,141,1.043,142,1.375,143,1.375,144,1.166,145,1.375,146,2.319,147,1.375,148,1.375,149,1.375,150,1.966,151,1.375,152,0.368,153,0.774,154,1.375,155,1.166,156,1.375,157,2.319,158,1.733,159,0.368,160,1.375,161,1.375,162,1.375,163,1.375,164,1.166,165,1.028,166,1.166,167,1.375,168,1.375,169,3.006,170,1.028,171,1.375,172,1.043,173,1.375,174,1.166,175,1.375,176,1.375,177,1.375,178,1.375,179,1.375,180,0.716,181,1.375,182,0.774,183,1.375,184,1.375,185,1.375,186,1.375,187,1.375,188,1.375]],["title/3",[189,2.91]],["description/3",[54,2.679,58,3.155,69,2.163,190,5.148,191,3.463,192,5.148]],["title/4",[69,1.468,193,2.962]],["description/4",[0,0.926,1,3.302,5,1.28,6,0.692,7,0.608,8,0.692,32,1.329,36,0.692,38,0.868,39,0.992,41,0.848,43,1.317,51,0.748,54,0.521,55,0.613,58,0.613,62,0.748,68,0.748,69,1.503,75,0.848,94,0.673,95,0.483,98,0.992,102,0.748,103,0.341,105,0.848,111,0.613,119,1.329,123,1.185,150,0.848,158,0.748,165,0.748,180,0.521,182,0.563,191,2.906,193,4.198,194,4.672,195,1.494,196,1,197,1,198,1,199,1,200,1,201,1,202,1,203,2.361,204,1,205,1,206,2.367,207,2.845,208,1,209,1,210,1,211,1,212,1,213,1.762,214,2.002,215,1.762,216,1,217,0.848,218,1,219,2.182,220,1,221,1,222,1,223,1,224,1,225,0.304,226,1.317,227,1.494,228,1,229,0.848,230,1,231,2.412,232,1,233,1.494,234,1,235,1,236,1,237,0.673,238,1.494,239,0.848,240,1,241,0.848,242,0.848,243,1,244,1,245,1,246,1,247,1,248,1.762,249,1,250,1,251,1,252,1.08,253,1,254,1,255,1,256,1,257,1,258,0.848,259,0.748,260,2.002,261,1,262,1,263,1,264,2.845,265,1.494,266,1.762,267,1,268,1.762,269,1,270,1,271,1,272,1,273,1,274,1,275,1,276,1,277,1.494,278,1,279,1,280,0.848,281,1,282,1.762,283,0.848,284,1]],["title/5",[191,2.35,285,3.494]],["description/5",[1,3.425,5,1.286,6,1.62,7,0.987,8,1.123,39,1.418,47,2.862,49,0.787,54,0.668,56,0.96,69,1.201,81,3.463,94,2.27,103,0.412,164,2.423,165,0.96,189,2.27,191,3.772,217,2.423,231,1.089,242,1.089,252,2.962,265,1.089,286,2.188,287,1.284,288,1.284,289,2.423,290,3.494,291,2.858,292,2.858,293,1.923,294,3.376,295,4.399,296,2.858,297,2.858,298,1.284,299,1.284,300,2.188,301,2.858,302,2.188,303,2.188,304,1.284,305,2.858,306,2.858,307,2.858,308,1.089,309,1.284,310,1.284,311,1.284,312,1.089,313,1.284,314,1.284,315,1.284,316,0.96,317,1.284,318,0.96,319,2.188,320,1.284,321,1.284,322,1.284,323,1.284,324,1.284]],["title/6",[0,0.836,38,0.528,170,2.19]],["description/6",[6,1.904,7,1.673,8,1.904,54,2.522,58,2.97,62,3.622,325,4.846,326,4.846,327,4.846,328,4.846]],["title/7",[6,1.373,95,1.688]],["description/7",[0,1.538,1,2.7,3,1.824,4,1.394,6,1.943,32,1.05,36,0.733,38,0.669,39,1.251,69,0.783,95,0.901,101,1.05,103,0.536,115,2.002,119,1.05,123,1.254,144,3.15,152,0.996,153,2.611,155,1.58,159,0.499,172,1.339,174,1.58,180,0.97,182,1.05,189,1.254,206,1.142,219,1.254,237,1.254,252,1.142,259,1.394,316,3.466,318,1.394,329,1.394,330,1.394,331,1.58,332,1.394,333,1.394,334,1.394,335,1.394,336,1.58,337,1.864,338,1.864,339,2.18,340,2.524,341,1.864,342,1.864,343,1.394,344,2.977,345,1.864,346,1.864,347,1.864,348,2.977,349,1.394,350,1.864,351,1.864,352,1.864,353,3.716,354,1.864,355,1.864,356,1.251,357,2.524,358,1.864,359,1.864,360,1.864,361,1.394,362,1.394,363,1.864]],["title/8",[8,1.373,95,1.688]],["description/8",[0,1.504,1,2.399,2,1.482,3,0.982,5,0.721,6,0.63,8,1.685,32,0.902,36,0.63,38,0.83,39,1.631,43,1.198,49,0.982,52,1.198,63,1.198,69,1.408,98,0.902,99,1.198,101,1.482,123,1.078,126,1.358,152,0.429,158,1.198,166,1.358,170,1.968,172,1.508,180,0.834,182,1.482,189,1.078,195,1.358,206,1.613,219,1.078,227,1.358,237,1.078,252,1.613,259,1.968,260,1.358,280,1.358,283,1.358,289,1.358,290,1.358,308,2.232,312,1.358,318,1.198,329,1.198,330,1.198,331,1.358,332,1.198,333,1.968,334,1.198,335,1.198,336,1.358,339,0.673,340,3.29,343,1.198,357,1.358,361,1.198,362,1.198,364,1.602,365,1.602,366,1.602,367,2.633,368,1.602,369,2.633,370,2.633,371,1.602,372,1.602,373,1.358,374,1.358,375,1.602,376,1.602,377,1.602,378,2.232,379,2.633,380,1.602,381,1.602,382,1.602,383,1.602,384,1.602,385,1.602,386,1.602,387,1.602,388,1.602,389,1.602,390,1.602,391,1.602,392,2.633,393,1.602,394,2.379,395,1.613,396,1.602,397,1.602,398,0.982,399,1.358,400,1.602,401,1.358,402,1.602]],["title/9",[7,1.206,95,1.688]],["description/9",[0,0.991,1,3.341,2,0.755,5,0.604,7,1.199,8,0.527,36,0.892,38,0.759,39,1.24,49,0.822,63,1.003,69,0.564,95,1.097,103,0.194,172,1.022,182,1.278,206,0.822,214,1.137,219,0.902,237,0.902,252,1.392,293,1.527,316,3.153,329,1.003,330,1.003,332,1.003,333,1.003,334,1.003,335,1.003,339,0.564,343,1.003,349,1.003,356,1.459,361,1.003,362,1.003,373,1.925,374,2.503,378,1.925,403,1.342,404,2.952,405,1.342,406,2.271,407,1.342,408,1.342,409,2.271,410,1.342,411,2.271,412,1.342,413,1.137,414,1.342,415,2.585,416,2.952,417,2.271,418,2.271,419,2.271,420,2.271,421,3.473,422,2.271,423,2.952,424,2.271,425,1.342,426,4.218,427,1.342,428,1.342,429,3.473,430,2.271,431,2.271,432,2.271,433,2.271,434,2.271,435,2.271,436,1.342,437,1.342,438,1.342,439,1.342,440,1.342,441,2.271,442,1.342,443,1.342,444,1.342,445,1.342,446,1.342,447,1.342,448,1.342,449,1.342,450,1.342,451,1.342,452,1.342,453,1.342,454,1.342]],["title/10",[0,0.72,5,1.135,103,0.364,293,1.697]],["description/10",[1,3.526,5,1.6,6,1.606,7,0.603,8,1.606,32,0.983,38,0.508,39,1.186,54,1.47,58,1.731,68,1.305,101,0.983,103,0.647,182,0.983,206,1.731,229,3.015,233,4.069,238,1.48,239,1.48,241,1.48,277,2.394,293,1.174,349,2.111,413,2.394,455,1.746,456,1.746,457,1.746,458,1.746,459,1.746,460,4.8,461,1.746,462,4.8,463,1.746,464,1.746,465,1.746,466,3.556,467,1.746,468,1.305,469,1.746,470,1.746,471,3.556,472,1.746,473,1.746,474,1.746,475,1.746,476,2.824,477,2.824,478,2.824,479,2.824,480,2.824]],["title/11",[7,1.494]],["description/11",[]],["title/12",[415,2.651]],["description/12",[0,1.383,7,1.673,36,1.904,118,2.522,159,1.298,172,2.18,356,2.036,415,2.97,481,4.108,482,4.846]],["title/13",[36,1.373,415,2.141]],["description/13",[0,1.344,7,1.625,36,2.26,118,2.45,159,1.261,172,2.118,339,1.978,356,1.978,415,2.885,481,3.991,483,4.708]],["title/14",[38,0.629,484,1.572]],["description/14",[0,1.289,7,1.559,38,0.813,55,2.767,115,3.037,118,2.916,159,1.501,356,1.897,468,3.375,484,2.031,485,3.827,486,4.515,487,4.515]],["title/15",[38,0.528,484,1.319,488,2.484]],["description/15",[0,1.289,7,1.559,38,0.813,55,2.767,115,3.037,118,2.916,159,1.501,356,1.897,468,3.375,485,3.827,488,3.827,489,4.515,490,4.515]],["title/16",[8,1.7]],["description/16",[]],["title/17",[38,0.629,394,2.141]],["description/17",[0,1.425,38,0.899,118,2.598,159,1.337,356,2.097,394,3.059,395,3.059,491,4.992]],["title/18",[36,1.373,394,2.141]],["description/18",[0,1.404,36,1.933,38,0.885,118,2.559,159,1.317,356,2.066,394,3.014,395,3.014,492,4.918]],["title/19",[152,1.159]],["description/19",[38,0.942,152,1.401,159,1.401,493,5.229,494,5.229]],["title/20",[398,2.651]],["description/20",[8,1.962,38,0.899,159,1.337,356,2.097,395,3.059,398,3.059,484,2.246,495,4.992]],["title/21",[398,2.141,496,2.962]],["description/21",[38,0.927,159,1.379,395,3.155,398,3.155,401,4.364,497,5.148]],["title/22",[6,1.7]],["description/22",[]],["title/23",[498,2.962,499,2.962]],["description/23",[6,2.023,225,1.565,498,4.364,499,4.364,500,4.364,501,5.148]],["title/24",[153,2.436]],["description/24",[103,0.67,153,3.209,159,1.243,172,2.088,180,2.415,225,1.411,356,1.95,399,3.935,484,2.088,502,2.242,503,1.602,504,4.641]],["title/25",[153,1.967,484,1.572]],["description/25",[21,3.463,153,2.898,180,2.679,225,1.565,484,2.316,505,5.148]],["title/26",[506,2.93,507,2.93,508,2.93]],["description/26",[509,5.583]],["title/27",[103,0.504,141,1.572]],["description/27",[69,1.897,103,0.879,111,2.767,141,2.867,159,1.209,225,1.373,502,2.181,503,1.559,510,4.515,511,4.515]],["title/28",[103,0.605,141,1.319]],["description/28",[103,0.859,141,2.246,225,1.518,502,2.412,512,4.232,513,3.059,514,4.992]],["title/29",[103,0.543,141,1.135,503,0.871]],["description/29",[103,0.859,141,2.246,225,1.518,502,2.412,503,1.723,512,4.232,515,4.992]],["title/30",[103,0.364,141,1.135,152,0.676,503,0.871]],["description/30",[38,0.791,103,0.634,141,1.977,152,1.612,225,1.336,339,1.846,516,2.956,517,4.394,518,2.956,519,3.725,520,3.725,521,2.693,522,3.725,523,3.725,524,4.394]],["title/31",[103,0.624]],["description/31",[38,0.942,103,0.754,111,3.205,225,1.59,525,5.229]],["title/32",[103,0.504,503,1.206]],["description/32",[38,0.913,103,0.731,111,3.106,225,1.541,502,2.449,503,1.75,526,5.069]],["title/33",[103,0.543,484,1.135,503,0.871]],["description/33",[103,0.754,225,1.59,484,2.353,513,3.205,527,5.229]],["title/34",[38,0.528,496,2.484,528,1.796]],["description/34",[38,0.885,180,2.559,225,1.495,500,4.169,528,3.014,529,4.918,530,4.918,531,4.918,532,4.918]],["title/35",[152,0.936,339,1.468]],["description/35",[2,2.854,39,2.13,98,2.854,152,1.358,172,2.281,339,2.13,533,4.297]],["title/36",[152,0.936,521,2.141]],["description/36",[2,2.689,39,2.006,69,2.006,98,2.689,152,1.279,172,2.149,521,2.927,533,4.049,534,4.776,535,4.776,536,4.776]],["title/37",[152,1.008,339,1.06,503,0.871]],["description/37",[57,2.704,86,3.501,103,0.833,119,2.263,125,3.005,152,1.547,159,1.077,225,1.222,339,1.689,502,1.942,503,1.388,513,2.464,516,2.704,518,3.501,528,3.538,537,4.02]],["title/38",[152,0.785,503,1.012,538,2.93]],["description/38",[57,2.704,86,3.501,103,0.833,119,2.263,125,3.005,152,1.547,159,1.077,225,1.222,502,1.942,503,1.388,513,2.464,516,2.704,518,3.501,521,2.464,528,3.538,539,4.02]],["title/39",[152,1.159]],["description/39",[57,2.549,86,3.369,103,0.809,119,2.134,152,1.599,159,1.015,225,1.152,339,1.592,502,1.831,503,1.308,513,2.322,516,2.549,518,3.369,519,3.213,520,3.213,521,2.322,522,3.213,523,3.213,528,3.438,540,3.789]],["title/40",[541,4.326]],["description/40",[]],["title/41",[226,3.234]],["description/41",[0,1.469,101,2.898,159,1.379,226,4.534,258,4.364]]],"invertedIndex":[["",{"_index":1,"title":{"0":{}},"description":{"4":{},"5":{},"7":{},"8":{},"9":{},"10":{}}}],["1",{"_index":54,"title":{},"description":{"1":{},"2":{},"3":{},"4":{},"5":{},"6":{},"10":{}}}],["2",{"_index":58,"title":{},"description":{"1":{},"3":{},"4":{},"6":{},"10":{}}}],["2020",{"_index":15,"title":{},"description":{"0":{}}}],["3",{"_index":62,"title":{},"description":{"1":{},"4":{},"6":{}}}],["500",{"_index":447,"title":{},"description":{"9":{}}}],["52056",{"_index":479,"title":{},"description":{"10":{}}}],["52056:52056",{"_index":234,"title":{},"description":{"4":{}}}],["785907",{"_index":29,"title":{},"description":{"0":{}}}],["9011",{"_index":480,"title":{},"description":{"10":{}}}],["945539",{"_index":24,"title":{},"description":{"0":{}}}],["a></cent",{"_index":188,"title":{},"description":{"2":{}}}],["abov",{"_index":334,"title":{},"description":{"7":{},"8":{},"9":{}}}],["access",{"_index":5,"title":{"0":{},"10":{}},"description":{"1":{},"2":{},"4":{},"5":{},"8":{},"9":{},"10":{}}}],["access-nod",{"_index":165,"title":{},"description":{"2":{},"4":{},"5":{}}}],["accessnod",{"_index":478,"title":{},"description":{"10":{}}}],["accord",{"_index":310,"title":{},"description":{"5":{}}}],["acquir",{"_index":35,"title":{},"description":{"1":{}}}],["act",{"_index":354,"title":{},"description":{"7":{}}}],["activ",{"_index":341,"title":{},"description":{"7":{}}}],["ad",{"_index":338,"title":{},"description":{"7":{}}}],["add",{"_index":280,"title":{},"description":{"4":{},"8":{}}}],["addit",{"_index":179,"title":{},"description":{"2":{}}}],["addition",{"_index":399,"title":{},"description":{"8":{},"24":{}}}],["adsfdsf](http://www.google.d",{"_index":228,"title":{},"description":{"4":{}}}],["advantag",{"_index":88,"title":{},"description":{"1":{}}}],["afterward",{"_index":343,"title":{},"description":{"7":{},"8":{},"9":{}}}],["against",{"_index":312,"title":{},"description":{"5":{},"8":{}}}],["aggreg",{"_index":116,"title":{},"description":{"2":{}}}],["agreement",{"_index":23,"title":{},"description":{"0":{}}}],["allow",{"_index":42,"title":{},"description":{"1":{},"2":{}}}],["alt=\"markdown",{"_index":133,"title":{},"description":{"2":{}}}],["analysi",{"_index":74,"title":{},"description":{"1":{}}}],["api",{"_index":101,"title":{},"description":{"1":{},"2":{},"7":{},"8":{},"10":{},"41":{}}}],["approach",{"_index":41,"title":{},"description":{"1":{},"4":{}}}],["arb::all_prob",{"_index":379,"title":{},"description":{"8":{}}}],["arb::cell_member_pred",{"_index":389,"title":{},"description":{"8":{}}}],["arb::context",{"_index":383,"title":{},"description":{"8":{}}}],["arb::recip",{"_index":386,"title":{},"description":{"8":{}}}],["arb::regular_schedule(1.0",{"_index":380,"title":{},"description":{"8":{}}}],["arb::schedul",{"_index":391,"title":{},"description":{"8":{}}}],["arb::simul",{"_index":388,"title":{},"description":{"8":{}}}],["arbor",{"_index":8,"title":{"0":{},"8":{},"16":{}},"description":{"2":{},"4":{},"5":{},"6":{},"8":{},"9":{},"10":{},"20":{}}}],["arbor-exampl",{"_index":249,"title":{},"description":{"4":{}}}],["arbor-modul",{"_index":242,"title":{},"description":{"4":{},"5":{}}}],["arbor/cel",{"_index":495,"title":{},"description":{"20":{}}}],["arbor/cellinfo",{"_index":497,"title":{},"description":{"21":{}}}],["arbor/prob",{"_index":491,"title":{},"description":{"17":{}}}],["arbor/probedata",{"_index":492,"title":{},"description":{"18":{}}}],["arbor/spik",{"_index":494,"title":{},"description":{"19":{}}}],["arbor](https://arbor-sim.org",{"_index":177,"title":{},"description":{"2":{}}}],["architectur",{"_index":108,"title":{"2":{}},"description":{"2":{}}}],["assum",{"_index":330,"title":{},"description":{"7":{},"8":{},"9":{}}}],["avail",{"_index":172,"title":{},"description":{"2":{},"7":{},"8":{},"9":{},"12":{},"13":{},"24":{},"35":{},"36":{}}}],["backend",{"_index":340,"title":{},"description":{"7":{},"8":{}}}],["base",{"_index":279,"title":{},"description":{"4":{}}}],["baseurl",{"_index":462,"title":{},"description":{"10":{}}}],["bash",{"_index":294,"title":{},"description":{"5":{}}}],["befor",{"_index":374,"title":{},"description":{"8":{},"9":{}}}],["begin",{"_index":530,"title":{},"description":{"34":{}}}],["below",{"_index":158,"title":{},"description":{"2":{},"4":{},"8":{}}}],["binari",{"_index":251,"title":{},"description":{"4":{}}}],["binary.<br",{"_index":475,"title":{},"description":{"10":{}}}],["boilerpl",{"_index":443,"title":{},"description":{"9":{}}}],["bottleneck",{"_index":60,"title":{},"description":{"1":{}}}],["br",{"_index":277,"title":{},"description":{"4":{},"10":{}}}],["brain",{"_index":26,"title":{},"description":{"0":{},"1":{}}}],["brain](https://www.thevirtualbrain.org/tvb/zwei",{"_index":178,"title":{},"description":{"2":{}}}],["build",{"_index":191,"title":{"5":{}},"description":{"3":{},"4":{},"5":{}}}],["c",{"_index":289,"title":{},"description":{"5":{},"8":{}}}],["call",{"_index":426,"title":{},"description":{"9":{}}}],["case",{"_index":209,"title":{},"description":{"4":{}}}],["cd",{"_index":295,"title":{},"description":{"5":{}}}],["cell",{"_index":398,"title":{"20":{},"21":{}},"description":{"8":{},"20":{},"21":{}}}],["cell_member_pred",{"_index":393,"title":{},"description":{"8":{}}}],["cell_pr",{"_index":390,"title":{},"description":{"8":{}}}],["center;\"/></cent",{"_index":137,"title":{},"description":{"2":{}}}],["center><a",{"_index":184,"title":{},"description":{"2":{}}}],["center><img",{"_index":131,"title":{},"description":{"2":{}}}],["center>figur",{"_index":138,"title":{},"description":{"2":{}}}],["central",{"_index":114,"title":{},"description":{"2":{}}}],["chang",{"_index":235,"title":{},"description":{"4":{}}}],["clone",{"_index":286,"title":{},"description":{"5":{}}}],["close",{"_index":441,"title":{},"description":{"9":{}}}],["cmake",{"_index":290,"title":{},"description":{"5":{},"8":{}}}],["cmakelist",{"_index":364,"title":{},"description":{"8":{}}}],["code",{"_index":373,"title":{},"description":{"8":{},"9":{}}}],["collect",{"_index":141,"title":{"27":{},"28":{},"29":{},"30":{}},"description":{"2":{},"27":{},"28":{},"29":{},"30":{}}}],["compat",{"_index":200,"title":{},"description":{"4":{}}}],["compil",{"_index":318,"title":{},"description":{"5":{},"7":{},"8":{}}}],["compilation.<br",{"_index":336,"title":{},"description":{"7":{},"8":{}}}],["complet",{"_index":63,"title":{},"description":{"1":{},"8":{},"9":{}}}],["compose](https://docs.docker.com/compos",{"_index":198,"title":{},"description":{"4":{}}}],["comput",{"_index":149,"title":{},"description":{"2":{}}}],["config",{"_index":456,"title":{},"description":{"10":{}}}],["config.{toml,yaml",{"_index":472,"title":{},"description":{"10":{}}}],["configur",{"_index":293,"title":{"10":{}},"description":{"5":{},"9":{},"10":{}}}],["connect",{"_index":356,"title":{},"description":{"7":{},"9":{},"12":{},"13":{},"14":{},"15":{},"17":{},"18":{},"20":{},"24":{}}}],["consist",{"_index":109,"title":{},"description":{"2":{}}}],["const",{"_index":385,"title":{},"description":{"8":{}}}],["constraint",{"_index":53,"title":{},"description":{"1":{}}}],["consum",{"_index":71,"title":{},"description":{"1":{}}}],["contact",{"_index":107,"title":{},"description":{"1":{}}}],["contain",{"_index":219,"title":{},"description":{"4":{},"7":{},"8":{},"9":{}}}],["container",{"_index":201,"title":{},"description":{"4":{}}}],["context",{"_index":89,"title":{},"description":{"1":{}}}],["convien",{"_index":128,"title":{},"description":{"2":{}}}],["correct",{"_index":350,"title":{},"description":{"7":{}}}],["correspond",{"_index":469,"title":{},"description":{"10":{}}}],["coupl",{"_index":433,"title":{},"description":{"9":{}}}],["cpm](https://github.com/cpm-cmake/cpm.cmak",{"_index":291,"title":{},"description":{"5":{}}}],["cpp",{"_index":370,"title":{},"description":{"8":{}}}],["creat",{"_index":144,"title":{},"description":{"2":{},"7":{}}}],["ctx",{"_index":384,"title":{},"description":{"8":{}}}],["curl",{"_index":222,"title":{},"description":{"4":{}}}],["current",{"_index":500,"title":{},"description":{"23":{},"34":{}}}],["data",{"_index":36,"title":{"13":{},"18":{}},"description":{"1":{},"2":{},"4":{},"7":{},"8":{},"9":{},"12":{},"13":{},"18":{}}}],["dataformat",{"_index":92,"title":{},"description":{"1":{}}}],["datapoint",{"_index":151,"title":{},"description":{"2":{}}}],["default",{"_index":400,"title":{},"description":{"8":{}}}],["depend",{"_index":81,"title":{},"description":{"1":{},"2":{},"5":{}}}],["depends_on",{"_index":248,"title":{},"description":{"4":{}}}],["deploy",{"_index":258,"title":{},"description":{"4":{},"41":{}}}],["deprec",{"_index":534,"title":{},"description":{"36":{}}}],["describ",{"_index":333,"title":{},"description":{"7":{},"8":{},"9":{}}}],["descript",{"_index":455,"title":{},"description":{"10":{}}}],["design",{"_index":82,"title":{},"description":{"1":{},"2":{}}}],["detector",{"_index":521,"title":{"36":{}},"description":{"30":{},"36":{},"38":{},"39":{}}}],["develop",{"_index":70,"title":{},"description":{"1":{}}}],["devic",{"_index":353,"title":{},"description":{"7":{}}}],["differ",{"_index":150,"title":{},"description":{"2":{},"4":{}}}],["directori",{"_index":474,"title":{},"description":{"10":{}}}],["disk",{"_index":48,"title":{},"description":{"1":{}}}],["distribut",{"_index":122,"title":{},"description":{"2":{}}}],["docker",{"_index":193,"title":{"4":{}},"description":{"4":{}}}],["docker-compos",{"_index":207,"title":{},"description":{"4":{}}}],["docker/simulators/dockerfile_arbor",{"_index":284,"title":{},"description":{"4":{}}}],["docker](#using-dock",{"_index":190,"title":{},"description":{"3":{}}}],["dockerfil",{"_index":264,"title":{},"description":{"4":{}}}],["dockerfile_accessnod",{"_index":268,"title":{},"description":{"4":{}}}],["dockerfile_arbor",{"_index":272,"title":{},"description":{"4":{}}}],["dockerfile_arborringexampl",{"_index":269,"title":{},"description":{"4":{}}}],["dockerfile_nest",{"_index":273,"title":{},"description":{"4":{}}}],["dockerfile_nestexampl",{"_index":270,"title":{},"description":{"4":{}}}],["dockerfile_tvb",{"_index":274,"title":{},"description":{"4":{}}}],["dockerfile_tvbexampl",{"_index":271,"title":{},"description":{"4":{}}}],["document",{"_index":166,"title":{},"description":{"2":{},"8":{}}}],["documentation](https://nest-simulator.readthedocs.io/en/master/installation/index.html",{"_index":311,"title":{},"description":{"5":{}}}],["download",{"_index":217,"title":{},"description":{"4":{},"5":{}}}],["duplic",{"_index":523,"title":{},"description":{"30":{},"39":{}}}],["dure",{"_index":292,"title":{},"description":{"5":{}}}],["dwith-nest=nest_install_path/bin/nest-config",{"_index":314,"title":{},"description":{"5":{}}}],["e.g",{"_index":123,"title":{},"description":{"2":{},"4":{},"7":{},"8":{}}}],["each",{"_index":210,"title":{},"description":{"4":{}}}],["earli",{"_index":76,"title":{},"description":{"1":{}}}],["ease-to-integr",{"_index":83,"title":{},"description":{"1":{}}}],["easi",{"_index":96,"title":{},"description":{"1":{},"2":{}}}],["easili",{"_index":143,"title":{},"description":{"2":{}}}],["easy-to-us",{"_index":84,"title":{},"description":{"1":{}}}],["embed",{"_index":170,"title":{"6":{}},"description":{"2":{},"8":{}}}],["enabl",{"_index":3,"title":{"0":{}},"description":{"1":{},"2":{},"7":{},"8":{}}}],["encod",{"_index":160,"title":{},"description":{"2":{}}}],["end",{"_index":531,"title":{},"description":{"34":{}}}],["endpoint",{"_index":115,"title":{},"description":{"2":{},"7":{},"14":{},"15":{}}}],["engin",{"_index":202,"title":{},"description":{"4":{}}}],["engine](https://www.docker.com",{"_index":197,"title":{},"description":{"4":{}}}],["env",{"_index":458,"title":{},"description":{"10":{}}}],["environ",{"_index":238,"title":{},"description":{"4":{},"10":{}}}],["european",{"_index":12,"title":{},"description":{"0":{}}}],["even",{"_index":121,"title":{},"description":{"2":{}}}],["exampl",{"_index":206,"title":{},"description":{"4":{},"7":{},"8":{},"9":{},"10":{}}}],["example](https://www.google.d",{"_index":362,"title":{},"description":{"7":{},"8":{},"9":{}}}],["examples/dockerfile_",{"_index":278,"title":{},"description":{"4":{}}}],["exist",{"_index":175,"title":{},"description":{"2":{}}}],["f",{"_index":215,"title":{},"description":{"4":{}}}],["favourit",{"_index":221,"title":{},"description":{"4":{}}}],["fetch",{"_index":481,"title":{},"description":{"12":{},"13":{}}}],["file",{"_index":68,"title":{},"description":{"1":{},"4":{},"10":{}}}],["file.<br",{"_index":368,"title":{},"description":{"8":{}}}],["filter",{"_index":126,"title":{},"description":{"2":{},"8":{}}}],["final",{"_index":440,"title":{},"description":{"9":{}}}],["find",{"_index":361,"title":{},"description":{"7":{},"8":{},"9":{}}}],["finish",{"_index":50,"title":{},"description":{"1":{}}}],["first",{"_index":49,"title":{},"description":{"1":{},"2":{},"5":{},"8":{},"9":{}}}],["follow",{"_index":182,"title":{},"description":{"2":{},"4":{},"7":{},"8":{},"9":{},"10":{}}}],["found",{"_index":181,"title":{},"description":{"2":{}}}],["four",{"_index":218,"title":{},"description":{"4":{}}}],["framework",{"_index":16,"title":{},"description":{"0":{}}}],["full",{"_index":157,"title":{},"description":{"2":{}}}],["function",{"_index":437,"title":{},"description":{"9":{}}}],["fund",{"_index":11,"title":{},"description":{"0":{}}}],["further",{"_index":55,"title":{},"description":{"1":{},"2":{},"4":{},"14":{},"15":{}}}],["gener",{"_index":541,"title":{"40":{}},"description":{}}],["git",{"_index":287,"title":{},"description":{"5":{}}}],["given",{"_index":516,"title":{},"description":{"30":{},"37":{},"38":{},"39":{}}}],["go",{"_index":45,"title":{},"description":{"1":{}}}],["goal",{"_index":31,"title":{"1":{}},"description":{}}],["grant",{"_index":22,"title":{},"description":{"0":{}}}],["here",{"_index":237,"title":{},"description":{"4":{},"7":{},"8":{},"9":{}}}],["heunint",{"_index":435,"title":{},"description":{"9":{}}}],["horizon",{"_index":14,"title":{},"description":{"0":{}}}],["href=\"http://www.google.de\"><img",{"_index":185,"title":{},"description":{"2":{}}}],["http",{"_index":99,"title":{},"description":{"1":{},"2":{},"8":{}}}],["httpbackend(const",{"_index":382,"title":{},"description":{"8":{}}}],["https://github.com/arbor-sim/arbor",{"_index":309,"title":{},"description":{"5":{}}}],["https://github.com/crowcpp/crow",{"_index":307,"title":{},"description":{"5":{}}}],["https://github.com/gabime/spdlog",{"_index":301,"title":{},"description":{"5":{}}}],["https://github.com/google/flatbuff",{"_index":302,"title":{},"description":{"5":{}}}],["https://github.com/ijl/orjson",{"_index":323,"title":{},"description":{"5":{}}}],["https://github.com/jbeder/yaml-cpp",{"_index":298,"title":{},"description":{"5":{}}}],["https://github.com/libcpr/cpr",{"_index":299,"title":{},"description":{"5":{}}}],["https://github.com/marzer/tomlplusplu",{"_index":303,"title":{},"description":{"5":{}}}],["https://github.com/nest/nest-simul",{"_index":315,"title":{},"description":{"5":{}}}],["https://github.com/numpy/numpi",{"_index":324,"title":{},"description":{"5":{}}}],["https://github.com/olivierldff/asio.cmak",{"_index":304,"title":{},"description":{"5":{}}}],["https://github.com/tartanllama/opt",{"_index":305,"title":{},"description":{"5":{}}}],["https://github.com/tencent/rapidjson",{"_index":306,"title":{},"description":{"5":{}}}],["https://github.com/vrgrouprwth/insite.git",{"_index":288,"title":{},"description":{"5":{}}}],["https://github.com/zaphoyd/websocketpp",{"_index":300,"title":{},"description":{"5":{}}}],["https://www.google.d",{"_index":261,"title":{},"description":{"4":{}}}],["human",{"_index":25,"title":{},"description":{"0":{}}}],["icon",{"_index":135,"title":{},"description":{"2":{}}}],["id",{"_index":503,"title":{"29":{},"30":{},"32":{},"33":{},"37":{},"38":{}},"description":{"24":{},"27":{},"29":{},"32":{},"37":{},"38":{},"39":{}}}],["imag",{"_index":194,"title":{},"description":{"4":{}}}],["images](#builddockerimag",{"_index":205,"title":{},"description":{"4":{}}}],["images](#using-pre-built-imag",{"_index":204,"title":{},"description":{"4":{}}}],["import",{"_index":404,"title":{},"description":{"9":{}}}],["in-situ",{"_index":145,"title":{},"description":{"2":{}}}],["in-transit",{"_index":4,"title":{"0":{}},"description":{"1":{},"7":{}}}],["includ",{"_index":369,"title":{},"description":{"8":{}}}],["info",{"_index":496,"title":{"21":{},"34":{}},"description":{}}],["inform",{"_index":180,"title":{},"description":{"2":{},"4":{},"7":{},"8":{},"24":{},"25":{},"34":{}}}],["initi",{"_index":410,"title":{},"description":{"9":{}}}],["innov",{"_index":19,"title":{},"description":{"0":{}}}],["insight",{"_index":77,"title":{},"description":{"1":{}}}],["insit",{"_index":0,"title":{"0":{},"6":{},"10":{}},"description":{"1":{},"2":{},"4":{},"7":{},"8":{},"9":{},"12":{},"13":{},"14":{},"15":{},"17":{},"18":{},"41":{}}}],["insite'",{"_index":102,"title":{},"description":{"1":{},"2":{},"4":{}}}],["insite-access-nod",{"_index":231,"title":{},"description":{"4":{},"5":{}}}],["insite-arbor",{"_index":308,"title":{},"description":{"5":{},"8":{}}}],["insite-arbor-exampl",{"_index":477,"title":{},"description":{"10":{}}}],["insite-en",{"_index":259,"title":{},"description":{"4":{},"7":{},"8":{}}}],["insite-nest-exampl",{"_index":476,"title":{},"description":{"10":{}}}],["insite-nest-modul",{"_index":240,"title":{},"description":{"4":{}}}],["insite/arbor/pipeline_backend.h",{"_index":371,"title":{},"description":{"8":{}}}],["insite::httpbackend",{"_index":375,"title":{},"description":{"8":{}}}],["insite_access_node_port",{"_index":464,"title":{},"description":{"10":{}}}],["insite_access_node_url",{"_index":247,"title":{},"description":{"4":{}}}],["insite_access_node_wsport",{"_index":467,"title":{},"description":{"10":{}}}],["insite_arbor_base_url",{"_index":241,"title":{},"description":{"4":{},"10":{}}}],["insite_arbor_num_nod",{"_index":463,"title":{},"description":{"10":{}}}],["insite_backend(context",{"_index":376,"title":{},"description":{"8":{}}}],["insite_monitor_wrapp",{"_index":408,"title":{},"description":{"9":{}}}],["insite_multimet",{"_index":346,"title":{},"description":{"7":{}}}],["insite_nest_base_url",{"_index":239,"title":{},"description":{"4":{},"10":{}}}],["insite_nest_num_nod",{"_index":461,"title":{},"description":{"10":{}}}],["insite_raw",{"_index":423,"title":{},"description":{"9":{}}}],["insite_spati",{"_index":421,"title":{},"description":{"9":{}}}],["insite_spike_record",{"_index":344,"title":{},"description":{"7":{}}}],["insite_websocketmanag",{"_index":405,"title":{},"description":{"9":{}}}],["insite_ws_manag",{"_index":411,"title":{},"description":{"9":{}}}],["insite_ws_manager.clos",{"_index":454,"title":{},"description":{"9":{}}}],["insite_ws_manager.connect",{"_index":445,"title":{},"description":{"9":{}}}],["insite_ws_manager.send_end_sim",{"_index":453,"title":{},"description":{"9":{}}}],["insite_ws_manager.send_sim_info(sim",{"_index":449,"title":{},"description":{"9":{}}}],["insite_ws_manager.send_start_sim",{"_index":448,"title":{},"description":{"9":{}}}],["insitemonitorwrapp",{"_index":409,"title":{},"description":{"9":{}}}],["insiteopcod",{"_index":407,"title":{},"description":{"9":{}}}],["insitewebsocketmanag",{"_index":406,"title":{},"description":{"9":{}}}],["inspect",{"_index":485,"title":{},"description":{"14":{},"15":{}}}],["instal",{"_index":189,"title":{"3":{}},"description":{"5":{},"7":{},"8":{}}}],["installation.<br",{"_index":403,"title":{},"description":{"9":{}}}],["installed.<br",{"_index":199,"title":{},"description":{"4":{}}}],["instanc",{"_index":118,"title":{},"description":{"2":{},"12":{},"13":{},"14":{},"15":{},"17":{},"18":{}}}],["instead.<br",{"_index":535,"title":{},"description":{"36":{}}}],["integr",{"_index":95,"title":{"7":{},"8":{},"9":{}},"description":{"1":{},"2":{},"4":{},"7":{},"9":{}}}],["integration](#arborintegr",{"_index":326,"title":{},"description":{"6":{}}}],["integration](#nestintegr",{"_index":325,"title":{},"description":{"6":{}}}],["integrations](#tvbintegr",{"_index":327,"title":{},"description":{"6":{}}}],["involv",{"_index":317,"title":{},"description":{"5":{}}}],["j",{"_index":297,"title":{},"description":{"5":{}}}],["json",{"_index":161,"title":{},"description":{"2":{}}}],["kernel",{"_index":498,"title":{"23":{}},"description":{"23":{}}}],["key",{"_index":457,"title":{},"description":{"10":{}}}],["knowledg",{"_index":146,"title":{},"description":{"2":{}}}],["l",{"_index":223,"title":{},"description":{"4":{}}}],["languag",{"_index":163,"title":{},"description":{"2":{}}}],["larg",{"_index":67,"title":{},"description":{"1":{}}}],["layer",{"_index":110,"title":{},"description":{"2":{}}}],["lead",{"_index":66,"title":{},"description":{"1":{}}}],["length",{"_index":446,"title":{},"description":{"9":{}}}],["level",{"_index":140,"title":{},"description":{"2":{}}}],["link",{"_index":227,"title":{},"description":{"4":{},"8":{}}}],["link](registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-access-nod",{"_index":257,"title":{},"description":{"4":{}}}],["link](registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-arbor",{"_index":254,"title":{},"description":{"4":{}}}],["link](registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-nest-modul",{"_index":255,"title":{},"description":{"4":{}}}],["link](registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-tvb-modul",{"_index":256,"title":{},"description":{"4":{}}}],["list",{"_index":502,"title":{},"description":{"24":{},"27":{},"28":{},"29":{},"32":{},"37":{},"38":{},"39":{}}}],["local",{"_index":236,"title":{},"description":{"4":{}}}],["localhost:52056",{"_index":220,"title":{},"description":{"4":{}}}],["localhost:52056/vers",{"_index":224,"title":{},"description":{"4":{}}}],["locat",{"_index":266,"title":{},"description":{"4":{}}}],["machin",{"_index":65,"title":{},"description":{"1":{}}}],["made",{"_index":367,"title":{},"description":{"8":{}}}],["main",{"_index":52,"title":{},"description":{"1":{},"2":{},"8":{}}}],["make",{"_index":94,"title":{},"description":{"1":{},"2":{},"4":{},"5":{}}}],["manual",{"_index":335,"title":{},"description":{"7":{},"8":{},"9":{}}}],["mean",{"_index":120,"title":{},"description":{"2":{}}}],["measur",{"_index":507,"title":{"26":{}},"description":{}}],["merg",{"_index":520,"title":{},"description":{"30":{},"39":{}}}],["middlewar",{"_index":33,"title":{},"description":{"1":{}}}],["mkdir",{"_index":296,"title":{},"description":{"5":{}}}],["model",{"_index":510,"title":{},"description":{"27":{}}}],["modul",{"_index":252,"title":{},"description":{"4":{},"5":{},"7":{},"8":{},"9":{}}}],["mon_raw",{"_index":417,"title":{},"description":{"9":{}}}],["mon_spat",{"_index":419,"title":{},"description":{"9":{}}}],["monitor",{"_index":415,"title":{"12":{},"13":{}},"description":{"9":{},"12":{},"13":{}}}],["monitors.raw",{"_index":418,"title":{},"description":{"9":{}}}],["monitors.spatialaverag",{"_index":420,"title":{},"description":{"9":{}}}],["monitorwrapp",{"_index":427,"title":{},"description":{"9":{}}}],["monitorwrapper(mon_raw,insite_ws_manag",{"_index":424,"title":{},"description":{"9":{}}}],["monitorwrapper(mon_spat,insite_ws_manag",{"_index":422,"title":{},"description":{"9":{}}}],["monster",{"_index":134,"title":{},"description":{"2":{}}}],["mpi",{"_index":124,"title":{},"description":{"2":{}}}],["multi-nod",{"_index":129,"title":{},"description":{"2":{}}}],["multimet",{"_index":153,"title":{"24":{},"25":{}},"description":{"2":{},"7":{},"24":{},"25":{}}}],["multimeterid",{"_index":508,"title":{"26":{}},"description":{}}],["multipl",{"_index":117,"title":{},"description":{"2":{}}}],["multiscal",{"_index":130,"title":{},"description":{"2":{}}}],["mutlimet",{"_index":506,"title":{"26":{}},"description":{}}],["name=\"arborintegration\"></a",{"_index":363,"title":{},"description":{"7":{}}}],["name=\"builddockerimages\"></a",{"_index":262,"title":{},"description":{"4":{}}}],["name=\"nestintegration\"></a",{"_index":328,"title":{},"description":{"6":{}}}],["name=\"tvbintegration\"></a",{"_index":402,"title":{},"description":{"8":{}}}],["nest",{"_index":6,"title":{"0":{},"7":{},"22":{}},"description":{"2":{},"4":{},"5":{},"6":{},"7":{},"8":{},"10":{},"23":{}}}],["nest'",{"_index":337,"title":{},"description":{"7":{}}}],["nest-exampl",{"_index":243,"title":{},"description":{"4":{}}}],["nest-modul",{"_index":313,"title":{},"description":{"5":{}}}],["nest.connect(nodes_ex",{"_index":358,"title":{},"description":{"7":{}}}],["nest.create(\"multimet",{"_index":347,"title":{},"description":{"7":{}}}],["nest.create(\"spike_record",{"_index":345,"title":{},"description":{"7":{}}}],["nest.install(\"insitemodul",{"_index":342,"title":{},"description":{"7":{}}}],["nest.setstatus(your_devic",{"_index":351,"title":{},"description":{"7":{}}}],["nest/kernelstatu",{"_index":501,"title":{},"description":{"23":{}}}],["nest/multimet",{"_index":504,"title":{},"description":{"24":{}}}],["nest/multimeters/{multimeterid",{"_index":505,"title":{},"description":{"25":{}}}],["nest/multimeters/{multimeterid}/attributes/{attributenam",{"_index":509,"title":{},"description":{"26":{}}}],["nest/nod",{"_index":525,"title":{},"description":{"31":{}}}],["nest/nodecollect",{"_index":511,"title":{},"description":{"27":{}}}],["nest/nodecollections/{nodecollectionid}/nod",{"_index":514,"title":{},"description":{"28":{}}}],["nest/nodecollections/{nodecollectionid}/nodes/id",{"_index":515,"title":{},"description":{"29":{}}}],["nest/nodecollections/{nodecollectionid}/spik",{"_index":524,"title":{},"description":{"30":{}}}],["nest/nodes/id",{"_index":526,"title":{},"description":{"32":{}}}],["nest/nodes/{nodeid",{"_index":527,"title":{},"description":{"33":{}}}],["nest/simulationtimeinfo",{"_index":532,"title":{},"description":{"34":{}}}],["nest/spik",{"_index":540,"title":{},"description":{"39":{}}}],["nest/spikedetector",{"_index":536,"title":{},"description":{"36":{}}}],["nest/spikedetectors/{spikedetectorid}/spik",{"_index":539,"title":{},"description":{"38":{}}}],["nest/spikerecord",{"_index":533,"title":{},"description":{"35":{},"36":{}}}],["nest/spikerecorders/{spikerecorderid}/spik",{"_index":537,"title":{},"description":{"37":{}}}],["nest](https://www.nest-simulator.org",{"_index":176,"title":{},"description":{"2":{}}}],["network",{"_index":155,"title":{},"description":{"2":{},"7":{}}}],["neural",{"_index":37,"title":{},"description":{"1":{},"2":{}}}],["neuron",{"_index":357,"title":{},"description":{"7":{},"8":{}}}],["new",{"_index":174,"title":{},"description":{"2":{},"7":{}}}],["next",{"_index":372,"title":{},"description":{"8":{}}}],["node",{"_index":103,"title":{"10":{},"27":{},"28":{},"29":{},"30":{},"31":{},"32":{},"33":{}},"description":{"1":{},"2":{},"4":{},"5":{},"7":{},"9":{},"10":{},"24":{},"27":{},"28":{},"29":{},"30":{},"31":{},"32":{},"33":{},"37":{},"38":{},"39":{}}}],["node.</cent",{"_index":142,"title":{},"description":{"2":{}}}],["node.<br",{"_index":275,"title":{},"description":{"4":{}}}],["non-invas",{"_index":173,"title":{},"description":{"2":{}}}],["nonetheless",{"_index":211,"title":{},"description":{"4":{}}}],["normal",{"_index":355,"title":{},"description":{"7":{}}}],["numberofnod",{"_index":460,"title":{},"description":{"10":{}}}],["occur",{"_index":493,"title":{},"description":{"19":{}}}],["off-the-shelf",{"_index":91,"title":{},"description":{"1":{}}}],["on",{"_index":125,"title":{},"description":{"2":{},"37":{},"38":{}}}],["option",{"_index":518,"title":{},"description":{"30":{},"37":{},"38":{},"39":{}}}],["oscil",{"_index":431,"title":{},"description":{"9":{}}}],["out",{"_index":61,"title":{},"description":{"1":{}}}],["overview",{"_index":401,"title":{},"description":{"8":{},"21":{}}}],["paradigm",{"_index":40,"title":{},"description":{"1":{}}}],["part",{"_index":111,"title":{},"description":{"2":{},"4":{},"27":{},"31":{},"32":{}}}],["pass",{"_index":452,"title":{},"description":{"9":{}}}],["pip",{"_index":319,"title":{},"description":{"5":{}}}],["pipelin",{"_index":2,"title":{"0":{}},"description":{"2":{},"8":{},"9":{},"35":{},"36":{}}}],["pipeline.<br",{"_index":360,"title":{},"description":{"7":{}}}],["pleas",{"_index":195,"title":{},"description":{"4":{},"8":{}}}],["plethora",{"_index":162,"title":{},"description":{"2":{}}}],["pluge",{"_index":168,"title":{},"description":{"2":{}}}],["plugin",{"_index":169,"title":{},"description":{"2":{}}}],["point",{"_index":106,"title":{},"description":{"1":{}}}],["port",{"_index":233,"title":{},"description":{"4":{},"10":{}}}],["possibl",{"_index":97,"title":{},"description":{"1":{},"2":{}}}],["poster:<br",{"_index":183,"title":{},"description":{"2":{}}}],["pre-built",{"_index":203,"title":{},"description":{"4":{}}}],["pre-instal",{"_index":253,"title":{},"description":{"4":{}}}],["present",{"_index":395,"title":{},"description":{"8":{},"17":{},"18":{},"20":{},"21":{}}}],["probe",{"_index":394,"title":{"17":{},"18":{}},"description":{"8":{},"17":{},"18":{}}}],["process",{"_index":56,"title":{},"description":{"1":{},"2":{},"5":{}}}],["programm",{"_index":17,"title":{},"description":{"0":{}}}],["project",{"_index":27,"title":{},"description":{"0":{}}}],["project/research",{"_index":9,"title":{},"description":{"0":{}}}],["properti",{"_index":484,"title":{"14":{},"15":{},"25":{},"33":{}},"description":{"14":{},"20":{},"24":{},"25":{},"33":{}}}],["protocol",{"_index":93,"title":{},"description":{"1":{}}}],["provid",{"_index":32,"title":{},"description":{"1":{},"2":{},"4":{},"7":{},"8":{},"10":{}}}],["public",{"_index":366,"title":{},"description":{"8":{}}}],["python",{"_index":316,"title":{},"description":{"5":{},"7":{},"9":{}}}],["queri",{"_index":98,"title":{},"description":{"1":{},"2":{},"4":{},"8":{},"35":{},"36":{}}}],["r",{"_index":321,"title":{},"description":{"5":{}}}],["rang",{"_index":86,"title":{},"description":{"1":{},"37":{},"38":{},"39":{}}}],["rate",{"_index":397,"title":{},"description":{"8":{}}}],["rcp",{"_index":387,"title":{},"description":{"8":{}}}],["receiv",{"_index":10,"title":{},"description":{"0":{}}}],["recip",{"_index":377,"title":{},"description":{"8":{}}}],["record",{"_index":339,"title":{"35":{},"37":{}},"description":{"7":{},"8":{},"9":{},"13":{},"30":{},"35":{},"37":{},"39":{}}}],["record_to\":\"insit",{"_index":352,"title":{},"description":{"7":{}}}],["refer",{"_index":260,"title":{},"description":{"4":{},"8":{}}}],["regist",{"_index":428,"title":{},"description":{"9":{}}}],["registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-access-nod",{"_index":232,"title":{},"description":{"4":{}}}],["registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-arbor-exampl",{"_index":250,"title":{},"description":{"4":{}}}],["registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-nest-exampl",{"_index":244,"title":{},"description":{"4":{}}}],["registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-tvb-exampl",{"_index":246,"title":{},"description":{"4":{}}}],["regular",{"_index":414,"title":{},"description":{"9":{}}}],["rel",{"_index":281,"title":{},"description":{"4":{}}}],["remov",{"_index":522,"title":{},"description":{"30":{},"39":{}}}],["repositori",{"_index":265,"title":{},"description":{"4":{},"5":{}}}],["repres",{"_index":104,"title":{},"description":{"1":{}}}],["request",{"_index":519,"title":{},"description":{"30":{},"39":{}}}],["requirements.txt",{"_index":322,"title":{},"description":{"5":{}}}],["research",{"_index":18,"title":{},"description":{"0":{}}}],["respect",{"_index":119,"title":{},"description":{"2":{},"4":{},"7":{},"37":{},"38":{},"39":{}}}],["respons",{"_index":171,"title":{},"description":{"2":{}}}],["rest",{"_index":100,"title":{},"description":{"1":{}}}],["retriev",{"_index":225,"title":{},"description":{"4":{},"23":{},"24":{},"25":{},"27":{},"28":{},"29":{},"30":{},"31":{},"32":{},"33":{},"34":{},"37":{},"38":{},"39":{}}}],["return",{"_index":159,"title":{},"description":{"2":{},"7":{},"12":{},"13":{},"14":{},"15":{},"17":{},"18":{},"19":{},"20":{},"21":{},"24":{},"27":{},"37":{},"38":{},"39":{},"41":{}}}],["root",{"_index":282,"title":{},"description":{"4":{}}}],["run",{"_index":43,"title":{},"description":{"1":{},"4":{},"8":{}}}],["same",{"_index":473,"title":{},"description":{"10":{}}}],["sampl",{"_index":396,"title":{},"description":{"8":{}}}],["save",{"_index":212,"title":{},"description":{"4":{}}}],["sched",{"_index":392,"title":{},"description":{"8":{}}}],["second",{"_index":167,"title":{},"description":{"2":{}}}],["section",{"_index":329,"title":{},"description":{"7":{},"8":{},"9":{}}}],["see",{"_index":156,"title":{},"description":{"2":{}}}],["send_end_sim",{"_index":439,"title":{},"description":{"9":{}}}],["send_sim_info(sim",{"_index":438,"title":{},"description":{"9":{}}}],["send_start_sim",{"_index":436,"title":{},"description":{"9":{}}}],["serv",{"_index":113,"title":{},"description":{"2":{}}}],["server",{"_index":112,"title":{},"description":{"2":{}}}],["servic",{"_index":230,"title":{},"description":{"4":{}}}],["set",{"_index":349,"title":{},"description":{"7":{},"9":{},"10":{}}}],["sga2",{"_index":30,"title":{},"description":{"0":{}}}],["sga3",{"_index":28,"title":{},"description":{"0":{}}}],["show",{"_index":442,"title":{},"description":{"9":{}}}],["signatur",{"_index":381,"title":{},"description":{"8":{}}}],["sim",{"_index":378,"title":{},"description":{"8":{},"9":{}}}],["sim(simulation_length=length",{"_index":451,"title":{},"description":{"9":{}}}],["sim.configur",{"_index":450,"title":{},"description":{"9":{}}}],["simul",{"_index":38,"title":{"6":{},"14":{},"15":{},"17":{},"34":{}},"description":{"1":{},"2":{},"4":{},"7":{},"8":{},"9":{},"10":{},"14":{},"15":{},"17":{},"18":{},"19":{},"20":{},"21":{},"30":{},"31":{},"32":{},"34":{}}}],["simulatiion",{"_index":90,"title":{},"description":{"1":{}}}],["simulation'",{"_index":147,"title":{},"description":{"2":{}}}],["simulation_info/<properti",{"_index":486,"title":{},"description":{"14":{}}}],["simulation_info/<property>/<properti",{"_index":489,"title":{},"description":{"15":{}}}],["simulator.simulator(model",{"_index":430,"title":{},"description":{"9":{}}}],["simulators/dockerfile_",{"_index":276,"title":{},"description":{"4":{}}}],["singl",{"_index":105,"title":{},"description":{"1":{},"4":{}}}],["some-name.yaml",{"_index":213,"title":{},"description":{"4":{}}}],["sourc",{"_index":285,"title":{"5":{}},"description":{}}],["source](#building-from-sourc",{"_index":192,"title":{},"description":{"3":{}}}],["specif",{"_index":21,"title":{},"description":{"0":{},"1":{},"2":{},"25":{}}}],["specifi",{"_index":513,"title":{},"description":{"28":{},"33":{},"37":{},"38":{},"39":{}}}],["speed",{"_index":59,"title":{},"description":{"1":{}}}],["spike",{"_index":152,"title":{"19":{},"30":{},"35":{},"36":{},"37":{},"38":{},"39":{}},"description":{"2":{},"7":{},"8":{},"19":{},"30":{},"35":{},"36":{},"37":{},"38":{},"39":{}}}],["spikedetector",{"_index":538,"title":{"38":{}},"description":{}}],["spikerecord",{"_index":348,"title":{},"description":{"7":{}}}],["src=\"figures/flow.png",{"_index":132,"title":{},"description":{"2":{}}}],["src=\"swagger/figures/poster.png",{"_index":186,"title":{},"description":{"2":{}}}],["start",{"_index":214,"title":{},"description":{"4":{},"9":{}}}],["statu",{"_index":499,"title":{"23":{}},"description":{"23":{}}}],["step",{"_index":517,"title":{},"description":{"30":{}}}],["stepsiz",{"_index":529,"title":{},"description":{"34":{}}}],["still",{"_index":44,"title":{},"description":{"1":{}}}],["store",{"_index":64,"title":{},"description":{"1":{}}}],["structur",{"_index":267,"title":{},"description":{"4":{}}}],["style=\"float",{"_index":136,"title":{},"description":{"2":{}}}],["style=\"height:400px",{"_index":187,"title":{},"description":{"2":{}}}],["subproperti",{"_index":488,"title":{"15":{}},"description":{"15":{}}}],["successfulli",{"_index":331,"title":{},"description":{"7":{},"8":{}}}],["such",{"_index":72,"title":{},"description":{"1":{},"2":{}}}],["sure",{"_index":196,"title":{},"description":{"4":{}}}],["syn_spec=\"excitatori",{"_index":359,"title":{},"description":{"7":{}}}],["system",{"_index":164,"title":{},"description":{"2":{},"5":{}}}],["take",{"_index":87,"title":{},"description":{"1":{}}}],["target_link_libraries(your_simul",{"_index":365,"title":{},"description":{"8":{}}}],["therefor",{"_index":283,"title":{},"description":{"4":{},"8":{}}}],["three",{"_index":208,"title":{},"description":{"4":{}}}],["through",{"_index":332,"title":{},"description":{"7":{},"8":{},"9":{}}}],["thu",{"_index":127,"title":{},"description":{"2":{}}}],["time",{"_index":528,"title":{"34":{}},"description":{"34":{},"37":{},"38":{},"39":{}}}],["toml",{"_index":471,"title":{},"description":{"10":{}}}],["tool",{"_index":75,"title":{},"description":{"1":{},"4":{}}}],["top",{"_index":139,"title":{},"description":{"2":{}}}],["topolog",{"_index":154,"title":{},"description":{"2":{}}}],["tradit",{"_index":46,"title":{},"description":{"1":{}}}],["tvb",{"_index":7,"title":{"0":{},"9":{},"11":{}},"description":{"2":{},"4":{},"5":{},"6":{},"9":{},"10":{},"12":{},"13":{},"14":{},"15":{}}}],["tvb-exampl",{"_index":245,"title":{},"description":{"4":{}}}],["tvb-modul",{"_index":320,"title":{},"description":{"5":{}}}],["tvb/monitor",{"_index":482,"title":{},"description":{"12":{}}}],["tvb/monitordata",{"_index":483,"title":{},"description":{"13":{}}}],["tvb/simulationinfo",{"_index":487,"title":{},"description":{"14":{}}}],["tvb/simulationinfo/{properti",{"_index":490,"title":{},"description":{"15":{}}}],["two",{"_index":51,"title":{},"description":{"1":{},"2":{},"4":{}}}],["under",{"_index":20,"title":{},"description":{"0":{}}}],["underli",{"_index":148,"title":{},"description":{"2":{}}}],["union’",{"_index":13,"title":{},"description":{"0":{}}}],["up",{"_index":216,"title":{},"description":{"4":{}}}],["url",{"_index":413,"title":{},"description":{"9":{},"10":{}}}],["us",{"_index":69,"title":{"4":{}},"description":{"1":{},"3":{},"4":{},"5":{},"7":{},"8":{},"9":{},"27":{},"36":{}}}],["user",{"_index":34,"title":{},"description":{"1":{},"2":{}}}],["usual",{"_index":425,"title":{},"description":{"9":{}}}],["valu",{"_index":468,"title":{},"description":{"10":{},"14":{},"15":{}}}],["var",{"_index":459,"title":{},"description":{"10":{}}}],["variabl",{"_index":470,"title":{},"description":{"10":{}}}],["version",{"_index":226,"title":{"41":{}},"description":{"4":{},"41":{}}}],["via",{"_index":39,"title":{},"description":{"1":{},"2":{},"4":{},"5":{},"7":{},"8":{},"9":{},"10":{},"35":{},"36":{}}}],["virtual",{"_index":79,"title":{},"description":{"1":{},"2":{}}}],["visual",{"_index":73,"title":{},"description":{"1":{},"2":{}}}],["websocket",{"_index":465,"title":{},"description":{"10":{}}}],["websocketmanager(address,9011",{"_index":444,"title":{},"description":{"9":{}}}],["websocketmanager(insite_access_node_url,9011",{"_index":412,"title":{},"description":{"9":{}}}],["websocketport",{"_index":466,"title":{},"description":{"10":{}}}],["what_to_watch",{"_index":429,"title":{},"description":{"9":{}}}],["white_matt",{"_index":432,"title":{},"description":{"9":{}}}],["white_matter_coupl",{"_index":434,"title":{},"description":{"9":{}}}],["whole",{"_index":57,"title":{},"description":{"1":{},"37":{},"38":{},"39":{}}}],["wide",{"_index":85,"title":{},"description":{"1":{}}}],["within",{"_index":512,"title":{},"description":{"28":{},"29":{}}}],["without",{"_index":78,"title":{},"description":{"1":{},"2":{}}}],["wrap",{"_index":416,"title":{},"description":{"9":{}}}],["written",{"_index":47,"title":{},"description":{"1":{},"5":{}}}],["yaml",{"_index":229,"title":{},"description":{"4":{},"10":{}}}],["yourself",{"_index":263,"title":{},"description":{"4":{}}}],["zero",{"_index":80,"title":{},"description":{"1":{}}}]],"pipeline":[]}},"options":{}};
+ const __redoc_state = {"menu":{"activeItemIdx":-1},"spec":{"data":{"openapi":"3.0.1","info":{"description":"# Insite - A Pipeline Enabling In-Transit Access for NEST, TVB and Arbor.\nThis project/research has received funding from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the\nSpecific Grant Agreement No. 945539 (Human Brain Project SGA3) and Specific Grant Agreement No. 785907 (Human Brain Project SGA2).\n## Goal \n\nInsite provides a middleware that enables users to acquire data from neural simulators via the in-transit paradigm.\nIn-transit approaches allow users to access data from a running simulation while the simulation is still going on.\nIn the traditional approach data from simulations is written to disk first, and can only be accessed after the simulation has finished.\nHowever, this has two main constraints:\n 1. Data can only be further processed after the whole simulation has finished.\n 2. Disk speed can be a bottleneck when simulating, as data has to be written out.\n 3. Data must be completely stored on the machine, leading to large files.\n\nUsing **Insite** allows users to develop data consumer, such as visualizations and analysis tools that allow **early insight** into the data **without storing data** with virtually **zero dependencies**.\n\n**Insite** was specifically designed to be **ease-to-integrate** and **easy-to-use** to allow a wide range of users to take advantage of in-transit approaches in the context of brain simulatiion.\nInsite uses off-the-shelf dataformats and protocols to make integration as easy as possible.\nData can be queried via an HTTP REST API from Insite's access node, which represents a single point of contact for the user.\n\n## Architecture\nInsite consists of two main layers. \nThe first part is the **Insite access node**, an HTTP server that serves as a centralized endpoints.\n\nThe access node aggregates data from multiple simulators (NEST, Arbor, TVB) and from multiple simulation instances, respectively.\nThis means, that even distributed simulations, e.g. via MPI, can be access as if it is only one simulation instances.\nData is aggregated at the access node and can then be filtered and accessed by the user.\nThus, allowing convienent access to multi-node multiscale simulations.\n\n<center><img src=\"figures/flow.png\" alt=\"Markdown Monster icon\"\nstyle=\"float: center;\"/></center>\n<center>Figure 1: Top level architecture of Insite. Data is collected from simulators and provided via an access node.</center>\n\nThis architecture enables users to easily create in-situ visualizations of neural simulations without the knowledge of the simulation's underlying architecture or any further knowledge about the computational distribution of the simulation.\nUsers can query the HTTP endpoint for different datapoints, such as: spike data, multimeter data, the topology of the neural network and so on (see full API below).\nThe returned data in encoded in JSON, thus allowing processing in a plethora of different languages and systems without Insite specific dependencies.\n\nThe access-node provides the full API to the Insite pipeline which is documented below.\n\nThe second part are **Insite's simulator plugings**. \nThe simulator plugin is embedded into the respective simulations and is responsible for collecting simulation data and making it available to the access node.\nThe simulators plugins are designed to be as non-invasive as possible to make integration into new and existing simulations easy.\nSimulator plugins are available for [NEST](https://www.nest-simulator.org/), [Arbor](https://arbor-sim.org/) and [The Virtual Brain](https://www.thevirtualbrain.org/tvb/zwei).\n\nAdditional information can be found on the following poster:<br/>\n<center><a href=\"figures/poster.pdf\"><img src=\"figures/poster.png\" alt=\"Markdown Monster icon\"\nstyle=\"height:400px\" /></a></center>\n\n# Installation \n1. [Using Docker](#Using-Docker)\n2. [Building From Source](#Building-From-Source)\n\n## Using Docker\nTo be able to use the Docker images please make sure that the [docker engine](https://www.docker.com) and [docker compose](https://docs.docker.com/compose/) are installed.<br>\n(Or docker compatible containerization engines)\n\nThere are two different approaches for using Insite with docker:\n1. [Using Pre-built Images](#Using-Pre-built-Images)\n2. [Build Docker Images](#BuildDockerImages)\n\n### Run the example\n\nThe docker-compose below provides an example with all three simulators.\nWhile in this case each simulator runs their own simulation, all data can be queried via the single access-node nonetheless.\nJust save the docker-compose as ```some-name.yaml``` and then start Insite with ```docker-compose -f some-name.yaml up```.\nDocker will download all four containers and start the simulations.\nYou can query the data from the examples from the access node via ```localhost:52056``` via your favourite tool, e.g.: ```curl -L localhost:52056/version/``` to retrieve the version.\n\n```yaml\nversion: \"3\"\n\nservices:\n insite-access-node:\n image:\n registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-access-node\n ports:\n - \"52056:52056\" # You can change the local part of the port here \n environment:\n INSITE_NEST_BASE_URL: \"insite-nest-module\"\n INSITE_ARBOR_BASE_URL: \"arbor-module\"\n\n nest-example:\n image:\n registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-nest-example\n\n tvb-example: \n image:\n registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-tvb-example\n environment:\n INSITE_ACCESS_NODE_URL: \"insite-access-node\"\n depends_on:\n - insite-access-node\n\n arbor-example: \n image:\n registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-arbor-example\n depends_on:\n - insite-access-node\n```\n\n### Using Pre-built Images\nWe provide pre-built images for NEST, Arbor, TVB and the Insite access node.\nThese images contain the respective simulator binaries and the **Insite simulator module** pre-installed:\n| Container | Link |\n|---|---|\n| Arbor | [Link](https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-arbor) |\n| NEST | [Link](https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-nest) |\n| TVB | [Link](https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-tvb) |\n| Access Node |[Link](https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-access-node) |\n\nYou can use these images to deploy your own Insite-enabled simulations.\nFor further information on how to that you can refer to our examples.\n<a name=\"BuildDockerImages\"></a>\n### Build Docker Images\n\nTo build the docker containers yourself you can use the provided Dockerfile in the repository.\n\nDockerfiles are located in the ```docker``` with the following structure:\n```\ndocker\n├── Dockerfile_AccessNode\n├── examples\n│ ├── Dockerfile_ArborRingExample\n│ ├── Dockerfile_NestExample\n│ └── Dockerfile_TVBExample\n└── simulators\n ├── Dockerfile_Arbor\n ├── Dockerfile_NEST\n └── Dockerfile_TVB\n```\n```Dockerfile_AccessNode``` builds Insite's access node.<br>\n```simulators/Dockerfile_*``` builds the respective simulators with Insite simulator modules integrated. <br> \n```examples/Dockerfile_*``` builds the respective examples. They are based on the simulator docker images but add example simulations. <br> \n\nThe Dockerfiles refer to relative locations starting at the repository root. Therefore, to build containers please build from the root and refer to the Dockerfiles, e.g.:\n``` docker build . -f docker/simulators/Dockerfile_Arbor```\n\n## Building From Source\n1. Clone this repository (`git clone https://github.com/VRGroupRWTH/insite.git`).\n\n### Building the Access Node\nThe access node is written in C++ and uses the CMake build system.\nDependencies are downloaded via [CPM](https://github.com/cpm-cmake/CPM.cmake) during configuration.\n\n```bash\ncd access-node\nmkdir build && cd build\ncmake ..\nmake -j insite-access-node\n```\nAccess node dependencies:\n- https://github.com/jbeder/yaml-cpp\n- https://github.com/libcpr/cpr\n- https://github.com/zaphoyd/websocketpp\n- https://github.com/gabime/spdlog\n- https://github.com/google/flatbuffers\n- https://github.com/marzer/tomlplusplus\n- https://github.com/OlivierLDff/asio.cmake\n- https://github.com/TartanLlama/optional\n- https://github.com/Tencent/rapidjson\n- https://github.com/CrowCpp/Crow\n\n### Building the Arbor Module\nThe arbor module is written in C++ and uses the CMake build system.\nDependencies are downloaded via [CPM](https://github.com/cpm-cmake/CPM.cmake) during configuration.\n\n```bash\ncd arbor-module\nmkdir build && cd build\ncmake ..\nmake -j insite-arbor \nmake install\n```\nArbor module dependencies:\n- https://github.com/arbor-sim/arbor\n- https://github.com/gabime/spdlog\n- https://github.com/marzer/tomlplusplus\n- https://github.com/TartanLlama/optional\n- https://github.com/Tencent/rapidjson\n- https://github.com/CrowCpp/Crow\n\n### Building the NEST Module\nThe nest module is written in C++ and uses the CMake build system.\nDependencies are downloaded via [CPM](https://github.com/cpm-cmake/CPM.cmake) during configuration.\nFirst build nest according to the the [nest documentation](https://nest-simulator.readthedocs.io/en/master/installation/index.html), then build against nest.\n\n```bash\ncd nest-module\nmkdir build && cd build\ncmake .. -Dwith-nest=NEST_INSTALL_PATH/bin/nest-config\nmake -j install \n```\nNEST module dependencies:\n- https://github.com/nest/nest-simulator\n- https://github.com/zaphoyd/websocketpp\n- https://github.com/gabime/spdlog\n- https://github.com/google/flatbuffers\n- https://github.com/TartanLlama/optional\n- https://github.com/Tencent/rapidjson\n- https://github.com/CrowCpp/Crow\n\n### Building the TVB module\nThe TVB module is written in Python and involves no compilation process.\nDependencies can be installed via pip:\n```bash\ncd tvb-module\npip install -r requirements.txt\n```\nTvb module dependencies:\n- https://github.com/ijl/orjson\n- https://github.com/numpy/numpy\n\n# Embedding Insite into Simulations\n1. [NEST Integration](#NESTIntegration)\n2. [Arbor Integration](#ArborIntegration)\n3. [TVB Integrations](#TVBIntegration)\n\n<a name=\"NESTIntegration\"></a>\n## NEST Integration\nThe following sections assumes that the Insite nest module was successfully compiled and installed and is available.\nEither through using the NEST insite container described above or by manual compilation.<br>\nInsite can be integrated into NEST simulation via NEST's Python API.\nA NEST simulation can be in-transit enabled by adding Insite recording backends into the simulation after activating Insite with:\n```python\nnest.Install(\"insitemodule\")\n```\nAfterwards, a new spike recorder or multimeter can be created with:\n```Python\n# Create spike recorder\ninsite_spike_recorder = nest.Create(\"spike_recorder\")\n\n#Create multimeter\ninsite_multimeter = nest.Create(\"multimeter\")\n```\n\nTo enable recording to Insite the spikerecorder and multimeter have to be set to the correct recording backend with:\n```python\nnest.SetStatus(YOUR_DEVICE, [{\"record_to\":\"insite\"}])\n```\nrespectively.\n\nThe recording devices act as normal NEST nodes and can be connected to other nodes, e.g., neurons:\n```python\nnest.Connect(nodes_ex, insite_spike_recorder, syn_spec=\"excitatory\")\n```\n\nAll neurons connected to Insite devices are available via the Insite pipeline.<br>\nEndpoints for spikerecorders and multimeters provide information about Insite-enabled nodes in the network while the spike and multimeter endpoints return data recorded by the devices.\n\n<a name=\"ArborIntegration\"></a>\n## Arbor Integration\nThe following sections assumes that the Insite nest module was successfully compiled and installed and is available.\nEither through using the Arbor insite container described above or by manual compilation.<br>\nInsite can be embedded into Arbor simulations via the Insite arbor C++ module.\nTherefore, arbor simulations using Insite must link against insite-arbor in their CMakeLists. E.g.: \n```cmake\ntarget_link_libraries(YOUR_SIMULATION PUBLIC insite-arbor)\n```\n\nAfterwards, the simulation can be made Insite-enabled by embedding the Insite pipeline backend into your simulation file.<br>\nFirst include the pipeline backend:\n```cpp\n#include <insite/arbor/pipeline_backend.h>\n```\nNext, add an Insite HTTP backend in your main code before running the simulation:\n```\n insite::HttpBackend insite_backend(context, recipe, sim, arb::all_probes,\n arb::regular_schedule(1.0));\n```\nThe signature is as follows:\n``` cpp\nHttpBackend(const arb::context& ctx,\n const arb::recipe& rcp,\n arb::simulation& sim,\n arb::cell_member_predicate cell_pred,\n arb::schedule sched);\n```\nThe ```cell_member_predicate``` can be used to filter the probes that should be made available via Insite.\nIn the example ```arb::all_probes``` enables all present probes to be accessed via Insite.\nThe ```sched``` describes the sampling rate of the Insite-enabled probes.\n\nThe Backend provides information about the cells present in the simulation. Additionally, the spikes of all neurons are recorded by default.\nAvailable probes and their data can be queried via the API.\n\nPlease refer to the API documentation below for a complete overview.\n\n<a name=\"TVBIntegration\"></a>\n## TVB Integration\nThe following sections assumes that the Insite TVB module is available.\nEither through using the Arbor insite container described above or by manual installation.<br>\n\nFirst import the Python TVB modules:\n```Python\nfrom insite_websocketmanager import InsiteWebSocketManager, InsiteOpcode\nfrom insite_monitor_wrapper import InsiteMonitorWrapper\n```\n\nafterwards initialize the ```InsiteWebSocketManager```:\n```Python\ninsite_ws_manager = WebSocketManager(INSITE_ACCESS_NODE_URL,9011)\n```\nthe access node url.\n\nTo record data to Insite regular monitors have to be wrapped via the InsiteMonitorWrapper:\n```Python\nmon_raw = monitors.Raw()\nmon_spat = monitors.SpatialAverage()\ninsite_spatial = MonitorWrapper(mon_spat,insite_ws_manager)\ninsite_raw = MonitorWrapper(mon_raw,insite_ws_manager)\n```\n\nMonitors can be configured as usual before calling the MonitorWrapper.\nAll wrapped monitors that are registered as monitors at the simulation will be will be available via Insite pipeline.\n\n```Python\nwhat_to_watch = [insite_raw, insite_spatial]\nsim = simulator.Simulator(model = oscilator, connectivity = white_matter,\n coupling = white_matter_coupling, \n integrator = heunint, monitors = what_to_watch)\n```\n\nBefore starting the simulation ```connect()``` and the ```send_start_sim()``` function must be called.\n```send_sim_info(sim)``` must be called before ```configure``` is called on the simulation.\nAfter the simulation ```send_end_sim()``` must be called.\nFinally, the connection can be close via the ```close()``` call.\n\nThe following code shows the complete boilerplate code for wrapping a TVB simulation:\n```Python\n\ninsite_ws_manager = WebSocketManager(address,9011)\n\ninsite_ws_manager.connect()\n\nmon_raw = monitors.Raw()\nmon_spat = monitors.SpatialAverage()\ninsite_spatial = MonitorWrapper(mon_spat,insite_ws_manager)\ninsite_raw = MonitorWrapper(mon_raw,insite_ws_manager)\n\nlength = 500\nwhat_to_watch = [insite_spatial]\n\n[simulation settings...]\n\n\ninsite_ws_manager.send_start_sim()\n\nsim = simulator.Simulator(model = oscilator, connectivity = white_matter,\n coupling = white_matter_coupling, \n integrator = heunint, monitors = what_to_watch)\n\ninsite_ws_manager.send_sim_info(sim)\nsim.configure()\n\nfor data in sim(simulation_length=length):\n pass\n\ninsite_ws_manager.send_end_sim()\ninsite_ws_manager.close()\n```\n# Insite Access Node Configuration\nThe following settings can be configured on the access node:\n| Description | config key | env var |\n|---|---|---|\n| \\#NEST Nodes | numberOfNodes | INSITE_NEST_NUM_NODES |\n| URL of NEST Simulator | baseUrl | INSITE_NEST_BASE_URL |\n| \\#Arbor Nodes | numberOfNodes | INSITE_ARBOR_NUM_NODES|\n| URL of Arbor Simulator | baseUrl | INSITE_ARBOR_BASE_URL |\n| Access Node API Port | port | INSITE_ACCESS_NODE_PORT |\n| Access Node Websocket Port (TVB Port) | websocketPort | INSITE_ACCESS_NODE_WSPORT |\n\nValues can be provided by settings the corresponding environment variable or via TOML or YAML in a config.{toml,yaml} file via the same directory as the binary.<br>\nToml example: <br>\n```toml\n[\"nest\"]\nnumberOfNodes = 2\nbaseUrl = \"insite-nest-example\"\n\n[\"arbor\"]\nnumberOfNodes = 1\nbaseUrl = \"insite-arbor-example\"\n\n[\"accessNode\"]\nport = 52056\nwebsocketPort = 9011\n```\n\nYaml example: <br>\n```yaml\nnest:\n numberOfNodes: 2\n baseUrl: \"insite-nest-example\"\narbor:\n numberOfNodes: 1\n baseUrl: \"insite-arbor-example\"\naccessNode:\n port: 52056\n websocketPort: 9011\n```\n","title":"Insite - In-Situ Pipeline REST API","version":"2.1.0"},"servers":[{"url":"http://localhost:52056/"}],"x-tagGroups":[{"name":"Insite API","tags":["TVB","Arbor","Nest","General"]}],"paths":{"/tvb/monitors/":{"get":{"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/TvbMonitors"}}},"description":"Operation successful."}},"description":"Returns monitors in the TVB instance that are connected to Insite and available to fetch data from.","summary":"Monitors","tags":["TVB"]}},"/tvb/monitorData/":{"get":{"parameters":[{"$ref":"#/components/parameters/gIdParameter"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/TvbMonitorData"}}},"description":"Operation successful."}},"description":"Returns recorded data from the monitors in the TVB instance that are connected to Insite and available to fetch data from.","summary":"Monitor Data","tags":["TVB"]}},"/tvb/simulationInfo/":{"get":{"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/TvbSimulationInfo"}}},"description":"Operation successful."}},"description":"Returns the simulation properties of the TVB instance connected to the the Insite instance. Returned values can be inspected further with the /simulation_info/<property> endpoint.","summary":"Simulation Properties","tags":["TVB"]}},"/tvb/simulationInfo/{property}":{"get":{"operationId":"nest_get_spikes_by_spikerecorder","parameters":[{"description":"Name of a property returned by /simulation_info or /simulation_info/other_prorperty.","explode":false,"in":"path","name":"property","required":true,"style":"simple"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/TvbSimulationInfoConnectivity"}}},"description":"Operation successful."}},"description":"Returns the simulation subproperties of the TVB instance connected to the the Insite instance. Returned values can be inspected further with the /simulation_info/<property>/<property>... endpoint.","summary":"Subproperties of Simulation Properties","tags":["TVB"]}},"/arbor/probes/":{"get":{"parameters":[{"$ref":"#/components/parameters/gIdParameter"},{"$ref":"#/components/parameters/lIdParameter"},{"$ref":"#/components/parameters/pIdParameter"},{"$ref":"#/components/parameters/uIdParameter"},{"$ref":"#/components/parameters/hashParameter"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ArborProbes"}}},"description":"Operation successful."}},"description":"Returns all probes that are present in the simulation and are connected to the Insite instance.","summary":"Simulation Probes","tags":["Arbor"]}},"/arbor/probeData/":{"get":{"parameters":[{"$ref":"#/components/parameters/gIdParameter"},{"$ref":"#/components/parameters/lIdParameter"},{"$ref":"#/components/parameters/pIdParameter"},{"$ref":"#/components/parameters/uIdParameter"},{"$ref":"#/components/parameters/hashParameter"},{"$ref":"#/components/parameters/fromTimeParameter"},{"$ref":"#/components/parameters/toTimehParameter"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ArborProbeData"}}},"description":"Operation successful."}},"description":"Returns data from the probes that are present in the simulation and are connected to the Insite instance.","summary":"Probe Data","tags":["Arbor"]}},"/arbor/spikes/":{"get":{"parameters":[{"$ref":"#/components/parameters/fromTimeParameter"},{"$ref":"#/components/parameters/toTimeParameter"},{"$ref":"#/components/parameters/gIdParameter"},{"$ref":"#/components/parameters/skipParameter"},{"$ref":"#/components/parameters/topParameter"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ArborSpikes"}}},"description":"Operation successful."}},"description":"Returns spikes that occured in the simulation.","summary":"Spikes","tags":["Arbor"]}},"/arbor/cells/":{"get":{"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ArborCells"}}},"description":"Operation successful."}},"description":"Returns the cells and their properties that are present in the connected Arbor simulation.","summary":"Cells","tags":["Arbor"]}},"/arbor/cellInfos/":{"get":{"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ArborCellInfos"}}},"description":"Operation successful."}},"description":"Returns an overview of the cells present in the simulation.","summary":"Cell Infos","tags":["Arbor"]}},"/nest/kernelStatus/":{"get":{"operationId":"nest_get_kernel_status","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/NestKernelStatus"},"type":"array"}}},"description":"Operation successful."}},"description":"Retrieves the current status of the NEST kernel.","summary":"Kernel Status","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/multimeters/":{"get":{"operationId":"nest_get_multimeters","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/MultimeterInfo"},"type":"array"}}},"description":"Operation successful."}},"summary":"Multimeters","description":"Retrieves a list with information about all available multimeters and their properties. Additionally, the ids of the nodes that are connected to the multimeter are returned.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/multimeters/{multimeterId}/":{"get":{"operationId":"nest_get_multimeter_by_id","parameters":[{"description":"The identifier of the multimeter.","explode":false,"in":"path","name":"multimeterId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/MultimeterInfo"}}},"description":"Operation successful."}},"summary":"Multimeter Properties","description":"Retrieves information about a specific multimeter that and its properties.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/multimeters/{multimeterId}/attributes/{attributeName}/":{"get":{"operationId":"nest_get_multimeter_measurements","parameters":[{"description":"The multimeter to query","explode":false,"in":"path","name":"multimeterId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"},{"description":"The attribute to query (e.g., 'V_m' for the membrane potential)","explode":false,"in":"path","name":"attributeName","required":true,"schema":{"type":"string"},"style":"simple"},{"description":"The start time (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The end time (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"A list of node IDs queried for attribute data.","explode":false,"in":"query","name":"nodeIds","required":false,"schema":{"items":{"format":"uint64","type":"integer"},"type":"array"},"style":"form"},{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},{"description":"The maximum number of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/MultimeterMeasurement"}}},"description":"Operation successful."}},"summary":"Mutlimeter Measurements By MultimeterId","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodeCollections/":{"get":{"operationId":"nest_get_node_collections","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/NestNodeCollectionProperties"},"type":"array"}}},"description":"Operation successful."}},"summary":"Node Collections","description":"Retrieves an list of all node collections. Returned are the node collection IDs, which nodes are part of the collection and which model is used by the collection.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodeCollections/{nodeCollectionId}/nodes/":{"get":{"operationId":"nest_get_nodes_by_node_collection","parameters":[{"description":"The identifier of the node collection","explode":false,"in":"path","name":"nodeCollectionId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"}],"responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/NestNodeProperties"},"type":"array"}}},"description":"Operation successful."}},"description":"Retrieves the list of all nodes within the specified node collection.","summary":"Nodes In Node Collection","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodeCollections/{nodeCollectionId}/nodes/ids/":{"get":{"operationId":"nest_get_node_ids_by_node_collection","parameters":[{"description":"The identifier of the node collection","explode":false,"in":"path","name":"nodeCollectionId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"}],"responses":{"200":{"content":{"application/json":{"schema":{"example":[1,2],"items":{"format":"uint64","type":"integer"},"type":"array"}}},"description":"Operation successful."}},"description":"Retrieves the list of all node ids within the node collection.","summary":"Node Ids In Node Collection","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodeCollections/{nodeCollectionId}/spikes/":{"get":{"operationId":"nest_get_spikes_by_node_collection","parameters":[{"description":"The identifier of the node collection.","explode":false,"in":"path","name":"nodeCollectionId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"},{"description":"The start time (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The end time (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},{"description":"The maximum numbers of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Spikes"}}},"description":"Operation successful."}},"summary":"Spikes By Node Collection ID","description":"Retrieves the spikes for the given simulation steps (optional) and node collection. This request merges the spikes recorded by all spike detectors and removes duplicates.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodes/":{"get":{"operationId":"nest_get_nodes","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/NestNodeProperties"},"type":"array"}}},"description":"Operation successful."}},"summary":"Nodes","description":"Retrieves all nodes that are part of the simulation.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodes/ids/":{"get":{"operationId":"nest_get_node_ids","responses":{"200":{"content":{"application/json":{"schema":{"example":[1,2,3,4],"items":{"format":"uint64","type":"integer"},"type":"array"}}},"description":"Operation successful."}},"description":"Retrieves a list with the IDs of all node that are part of the simulation.","summary":"Node Ids","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/nodes/{nodeId}/":{"get":{"operationId":"nest_get_node_by_id","parameters":[{"description":"The ID of the queried node.","explode":false,"in":"path","name":"nodeId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NestNodeProperties"}}},"description":"Operation successful."}},"summary":"Node Properties By Node ID","description":"Retrieves the properties of the specified node.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/simulationTimeInfo/":{"get":{"operationId":"nest_get_simulation_time_info","responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/SimulationTimeInfo"}}},"description":"Operation successful."}},"summary":"Simulation Time Info","description":"Retrieves simulation time information (stepSize, begin, current, end).","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/spikerecorders/":{"get":{"operationId":"nest_get_spikerecorders","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/SpikedetectorInfo"},"type":"array"}}},"description":"Operation successful."}},"summary":"Spike Recorders","description":"Queries all spike recorders that are available via the pipeline.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/spikedetectors/":{"get":{"deprecated":true,"operationId":"nest_get_spikedetectors","responses":{"200":{"content":{"application/json":{"schema":{"items":{"$ref":"#/components/schemas/SpikedetectorInfo"},"type":"array"}}},"description":"Operation successful."}},"summary":"Spike Detectors","description":"DEPRECATED: USE /nest/spikerecorders INSTEAD.<br> Queries all spike detectors that are available via the pipeline.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/spikerecorders/{spikerecorderId}/spikes/":{"get":{"operationId":"nest_get_spikes_by_spikerecorder","parameters":[{"description":"The ID of the spike detector to query.","explode":false,"in":"path","name":"spikerecorderId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"},{"description":"The start time in milliseconds (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The end time in milliseconds (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"A list of node IDs queried for spike data.","explode":false,"in":"query","name":"nodeIds","required":false,"schema":{"items":{"format":"uint64","type":"integer"},"type":"array"},"style":"form"},{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},{"description":"The maximum number of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Spikes"}}},"description":"Operation successful."}},"summary":"Spikes By Spike Recorder Id","description":"Retrieves the spikes for the given time range (optional) and node IDs (optional) from one spike recorder. If no time range or node list is specified, it will return the spikes for whole time or all nodes respectively.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/spikedetectors/{spikedetectorId}/spikes/":{"get":{"deprecated":true,"operationId":"nest_get_spikes_by_spikedetector","parameters":[{"description":"The ID of the spike detector to query.","explode":false,"in":"path","name":"spikedetectorId","required":true,"schema":{"format":"uint64","type":"integer"},"style":"simple"},{"description":"The start time in milliseconds (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The end time in milliseconds (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"A list of node IDs queried for spike data.","explode":false,"in":"query","name":"nodeIds","required":false,"schema":{"items":{"format":"uint64","type":"integer"},"type":"array"},"style":"form"},{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},{"description":"The maximum number of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Spikes"}}},"description":"Operation successful."}},"summary":"Spikes By Spikedetector Id","description":"Retrieves the spikes for the given time range (optional) and node IDs (optional) from one spike detector. If no time range or node list is specified, it will return the spikes for whole time or all nodes respectively.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/nest/spikes/":{"get":{"operationId":"nest_get_spikes","parameters":[{"description":"The start time in milliseconds (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"The end time in milliseconds (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},{"description":"A list of node IDs queried for spike data.","explode":false,"in":"query","name":"nodeIds","required":false,"schema":{"items":{"format":"uint64","type":"integer"},"type":"array"},"style":"form"},{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},{"description":"The maximum number of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Spikes"}}},"description":"Operation successful."}},"summary":"Spikes","description":"Retrieves the spikes for the given time range (optional) and node IDs (optional). If no time range or node list is specified, it will return the spikes for whole time or all nodes respectively. This request merges the spikes recorded by all spike detectors and removes duplicates.","tags":["Nest"],"x-swagger-router-controller":"access_node.controllers.nest_controller","x-openapi-router-controller":"access_node.controllers.nest_controller"}},"/version/":{"get":{"operationId":"get_version","responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Version"}}},"description":"Operation successful."}},"summary":"Versions","description":"Returns the deployed insite and API versions.","tags":["General"],"x-swagger-router-controller":"access_node.controllers.version_controller","x-openapi-router-controller":"access_node.controllers.version_controller"}}},"components":{"schemas":{"Version":{"example":{"api":{"v1":"1.3","v2":"2.1","v3":"3.5"},"insite":"4.6"},"properties":{"api":{"type":"string"},"insite":{"type":"string"}},"required":["api","insite"],"type":"object"},"ErrorResponse":{"properties":{"error":{"$ref":"#/components/schemas/Error"}},"required":["error"],"type":"object"},"Error":{"properties":{"code":{"description":"One of the error codes defined here: [...]","type":"string"},"message":{"description":"A human-readable representation of the error.","type":"string"},"innererror":{"$ref":"#/components/schemas/InnerError"}},"required":["code","message"],"type":"object"},"InnerError":{"properties":{"code":{"description":"One of the error codes defined here: [...]","type":"string"},"innererror":{"$ref":"#/components/schemas/InnerError"}},"required":["code"],"type":"object"},"Spikes":{"example":{"simulationTimes":[0.8,0.9],"nodeIds":[1,2],"lastFrame":false},"properties":{"simulationTimes":{"description":"Array of times where a spike occured. This array is always sorted.","items":{"format":"double","type":"number"},"type":"array"},"nodeIds":{"description":"Array of nodeIds that spiked. This array is sorted according to the spike times.","items":{"format":"uint64","type":"integer"},"type":"array"},"lastFrame":{"description":"Indicates if this frame includes the last spike of the finished simulation.","type":"boolean"}},"type":"object"},"MultimeterMeasurement":{"example":{"simulationTimes":[0.1,0.2],"nodeIds":[1,2,3],"values":[0.123,0.123,0.123,0.123,0.123,0.123]},"properties":{"simulationTimes":{"description":"This array is always sorted.","items":{"format":"double","type":"number"},"type":"array"},"nodeIds":{"items":{"format":"uint64","type":"integer"},"type":"array"},"values":{"description":"This array contains the measured values for each node ID and time to get the value for node ID n at time t you have to use the index n * length(simulationTimes) + t","items":{"type":"number"},"type":"array"}},"type":"object"},"NestNodeProperties":{"example":{"nodeId":1,"nodeCollectionId":0,"simulationNodeId":0,"position":[0.1,0.2],"model":"iaf_psc_delta","status":{"C_m":1,"Ca":0,"E_L":0,"I_e":0,"V_m":0,"V_min":-1.7976931348623157e+308,"V_reset":0,"V_th":20,"archiver_length":0,"beta_Ca":0.001}},"properties":{"nodeId":{"format":"uint64","type":"integer"},"nodeCollectionId":{"format":"uint64","type":"integer"},"model":{"type":"string"},"status":{"type":"object"},"position":{"items":{"type":"number"},"type":"array"}},"type":"object"},"NestNodeCollectionProperties":{"example":{"nodeCollectionId":0,"nodes":{"firstId":1,"lastId":100,"count":100},"model":{"name":"iaf_psc_delta","status":{"C_m":"1,","Ca":"0,","E_L":"0,","I_e":"0,","V_m":"0,","V_min":"-1.7976931348623157e+308,","V_reset":"0,","V_th":"20,"}}},"properties":{"nodeCollectionId":{"format":"uint64","type":"integer"},"nodes":{"$ref":"#/components/schemas/NestNodeCollectionNodes"},"model":{"$ref":"#/components/schemas/NestNodeModel"}},"type":"object"},"NestNodeModel":{"example":{"name":"iaf_psc_delta","status":{"C_m":"1,","Ca":"0,","E_L":"0,","I_e":"0,","V_m":"0,","V_min":"-1.7976931348623157e+308,","V_reset":"0,","V_th":"20,"}},"properties":{"name":{"type":"string"},"status":{"type":"object"}},"type":"object"},"NestNodeCollectionNodes":{"example":{"firstId":1,"lastId":100,"count":100},"properties":{"firstId":{"format":"uint64","type":"integer"},"lastId":{"format":"uint64","type":"integer"},"count":{"format":"uint64","type":"integer"}}},"SimulationTimeInfo":{"example":{"stepSize":0.1,"current":2.1,"begin":0.1,"end":4.5},"properties":{"stepSize":{"format":"double","type":"number"},"begin":{"format":"double","type":"number"},"end":{"format":"double","type":"number"},"current":{"format":"double","type":"number"}},"type":"object"},"MultimeterInfo":{"example":{"multimeterId":10,"attributes":["V_m"],"nodeIds":[1,3,5]},"properties":{"multimeterId":{"format":"uint64","type":"integer"},"attributes":{"items":{"type":"string"},"type":"array"},"nodeIds":{"items":{"format":"uint64","type":"integer"},"type":"array"}},"type":"object"},"SpikedetectorInfo":{"example":{"spikedetectorId":0,"nodeIds":[1,3,5]},"properties":{"spikedetectorId":{"format":"uint64","type":"integer"},"nodeIds":{"description":"These are the nodes connected to the spike detector.","items":{"format":"uint64","type":"integer"},"type":"array"}},"type":"object"},"ArborProbes":{"example":{"probes":[{"cell_gid":2,"cell_lid":1,"source_index":0,"probe_kind":"cable_probe_axial_current","hash":4294967298,"probe_global_index":11,"location":[0,0.5]},{"cell_gid":2,"cell_lid":0,"source_index":2,"probe_kind":"cable_probe_membrane_voltage","hash":562949953421314,"probe_global_index":10,"location":[0,0.3]}]}},"NestKernelStatus":{"type":"object","example":{"T_max":1152921504606846.8,"T_min":-1152921504606846.8,"adaptive_spike_buffers":true,"adaptive_target_buffers":true,"buffer_size_secondary_events":0,"buffer_size_spike_data":42,"buffer_size_target_data":125,"data_path":"","data_prefix":"","dict_miss_is_error":true,"grng_seed":0,"growth_factor_buffer_spike_data":1.5,"growth_factor_buffer_target_data":1.5,"keep_source_table":true,"local_num_threads":1,"local_spike_counter":745,"max_buffer_size_spike_data":8388608,"max_buffer_size_target_data":16777216,"max_delay":1.5,"max_num_syn_models":512,"min_delay":1.5,"ms_per_tic":0.001,"network_size":128,"num_connections":1750,"num_processes":1,"off_grid_spiking":false,"overwrite_files":true,"print_time":false,"recording_backends":{"ascii":{},"insite":{},"memory":{},"screen":{}},"resolution":0.1,"rng_seeds":[1],"sort_connections_by_source":true,"structural_plasticity_synapses":{},"structural_plasticity_update_interval":10000,"tics_per_ms":1000,"tics_per_step":100,"time":100,"time_collocate":0,"time_communicate":0,"to_do":0,"total_num_virtual_procs":1,"use_wfr":true,"wfr_comm_interval":1,"wfr_interpolation_order":3,"wfr_max_iterations":15,"wfr_tol":0.0001}},"TvbSimulationInfoConnectivity":{"example":{"Number of regions":76,"Number of connections":1560,"Undirected":false,"areas":" [min, median, max] = [0, 2580.89, 10338.2] dtype = float64 shape = (76,)","weights":" [min, median, max] = [0, 0, 3] dtype = float64 shape = (76, 76)","weights-non-zero":" [min, median, max] = [0.00462632, 2, 3] dtype = float64 shape = (1560,)","tract_lengths":" [min, median, max] = [0, 71.6635, 153.486] dtype = float64 shape = (76, 76)","tract_lengths-non-zero":" [min, median, max] = [4.93328, 74.0646, 153.486] dtype = float64 shape = (5402,)","tract_lengths (connections)":" [min, median, max] = [0, 55.8574, 138.454] dtype = float64 shape = (1560,)"}},"TvbSimulationInfo":{"example":{"Type":"Simulator","title":"Simulator gid: e0f27575-bc8c-4444-a298-0bd7a272ac43","connectivity":"Connectivity gid: de59731a-f13f-4103-a2d5-9182eb4ba213","conduction_speed":"3.0","coupling":"Linear gid: 520ba213-dee2-41c8-972d-95ffc71f6d38","surface":"None","stimulus":"None","model":"Generic2dOscillator gid: de979767-c3fb-4072-a8a0-5ff096b5ef21","integrator":"HeunDeterministic gid: 71890b28-7f4e-4cfa-a45c-ecb7ba92ef1a","initial_conditions":"None","monitors":"[<monitor_wrapper.MonitorWrapper object at 0x7fc7c94b5210>]","simulation_length":"1000.0","gid":"UUID('e0f27575-bc8c-4444-a298-0bd7a272ac43')"}},"ArborProbeData":{"example":{"probeData":[{"gid":2,"lid":1,"pid":0,"size":1000,"time":[0,0.9750000000000004,1.999999999999997,2.9999999999999933,3.99999999999999],"data":[-1.1013412404281553e-13,0.014220165459628968,0.012908425336631052,0.012920058448978668,0.013377748739968996]},{"gid":2,"lid":0,"pid":2,"size":1000,"time":[0,0.9750000000000004,1.999999999999997,2.9999999999999933,3.99999999999999],"data":[-65,-67.31833822951484,-68.46917744645607,-68.89870365000968,-69.03936729932849,-69.06695156902677]}]}},"ArborCells":{"example":{"cells":[{"gid":0,"cell_kind":"cable","cell_description":{"morphology":{"branches":[["(morphology\n ((4294967295 ((segment 0 (point 0 0 -6.30785 6.30785) (point 0 0 6.30785 6.30785) 1)))\n (0 ((segment 1 (point 0 0 6.30785 6.30785) (point 0 0 16.3079 0.5) 3)"]]},"label":{"regions":[{"name":"dend","region":"(tag 3)"},{"name":"soma","region":"(tag 1)"}],"locset":[]},"decor":{"painting":[{"region":"(region \"soma\")","paintable":{"type":"density","value":"hh"}},{"region":"(region \"dend\")","paintable":{"type":"density","value":"pas"}}],"placement":[{"region":"(location 0 0)","placeable":{"label":"detector","type":"threshold_detector"}},{"region":"(location 0 0.5)","placeable":{"label":"primary_syn","type":"synapse"},"value":"expsyn"}]}}}]},"type":"object"},"ArborCellInfos":{"example":{"CellInfos":[{"gid":0,"cell_kind":"cable","num_branches":19,"num_segments":231},{"gid":1,"cell_kind":"cable","num_branches":13,"num_segments":174},{"gid":2,"cell_kind":"cable","num_branches":19,"num_segments":216}]}},"TvbMonitors":{"example":[{"uid":"467bd4ff-3625-4440-9b3a-e7395cab5cc7","internalId":0,"type":"SpatialAverage","observedVariables":["V","W","V + W"]}]},"TvbMonitorData":{"example":[{"uid":"467bd4ff-3625-4440-9b3a-e7395cab5cc7","timesteps":[{"time":499.0234375,"V":[-0.19128321122285258],"W":[-0.08729334745723864],"V + W":[-0.2785765586800911]},{"time":500,"V":[-0.19128247282170338],"W":[-0.0872909920743438],"V + W":[-0.2785734648960471]}]}]},"ArborSpikes":{"example":{"simulationTimes":[0.8,0.9],"gIds":[1,2]},"properties":{"simulationTimes":{"description":"Array of times where a spike occured. This array is always sorted.","items":{"format":"double","type":"number"},"type":"array"},"nodeIds":{"description":"Array of nodeIds that spiked. This array is sorted according to the spike times.","items":{"format":"uint64","type":"integer"},"type":"array"}},"type":"object"}},"parameters":{"fromTimeParameter":{"description":"The start time in milliseconds (including) to be queried.","explode":true,"in":"query","name":"fromTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},"toTimeParameter":{"description":"The end time in milliseconds (excluding) to be queried.","explode":true,"in":"query","name":"toTime","required":false,"schema":{"format":"double","type":"number"},"style":"form"},"nodeIdParameter":{"description":"A list of node IDs queried for spike data.","explode":false,"in":"query","name":"nodeIds","required":false,"schema":{"items":{"format":"uint64","type":"integer"},"type":"array"},"style":"form"},"skipParameter":{"description":"The offset into the result.","explode":true,"in":"query","name":"skip","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"topParameter":{"description":"The maximum number of entries to be returned.","explode":true,"in":"query","name":"top","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"gIdParameter":{"description":"One or more gIds that should be filtered for.","explode":true,"in":"query","name":"gId","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"lIdParameter":{"description":"One or more lIds that should be filtered for.","explode":true,"in":"query","name":"lId","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"pIdParameter":{"description":"One or more pIds that should be filtered for.","explode":true,"in":"query","name":"pId","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"uIdParameter":{"description":"One or more uIds that should be filtered for.","explode":true,"in":"query","name":"uId","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"},"hashParameter":{"description":"One or more probe hashes that should be filtered for.","explode":true,"in":"query","name":"hash","required":false,"schema":{"format":"uint64","type":"integer"},"style":"form"}}}}},"searchIndex":{"store":["section/Insite-A-Pipeline-Enabling-In-Transit-Access-for-NEST-TVB-and-Arbor.","section/Insite-A-Pipeline-Enabling-In-Transit-Access-for-NEST-TVB-and-Arbor./Goal","section/Insite-A-Pipeline-Enabling-In-Transit-Access-for-NEST-TVB-and-Arbor./Architecture","section/Installation","section/Installation/Using-Docker","section/Installation/Building-From-Source","section/Embedding-Insite-into-Simulations","section/Embedding-Insite-into-Simulations/NEST-Integration","section/Embedding-Insite-into-Simulations/Arbor-Integration","section/Embedding-Insite-into-Simulations/TVB-Integration","section/Insite-Access-Node-Configuration","tag/TVB","tag/TVB/paths/~1tvb~1monitors~1/get","tag/TVB/paths/~1tvb~1monitorData~1/get","tag/TVB/paths/~1tvb~1simulationInfo~1/get","tag/TVB/operation/nest_get_spikes_by_spikerecorder","tag/Arbor","tag/Arbor/paths/~1arbor~1probes~1/get","tag/Arbor/paths/~1arbor~1probeData~1/get","tag/Arbor/paths/~1arbor~1spikes~1/get","tag/Arbor/paths/~1arbor~1cells~1/get","tag/Arbor/paths/~1arbor~1cellInfos~1/get","tag/Nest","tag/Nest/operation/nest_get_kernel_status","tag/Nest/operation/nest_get_multimeters","tag/Nest/operation/nest_get_multimeter_by_id","tag/Nest/operation/nest_get_multimeter_measurements","tag/Nest/operation/nest_get_node_collections","tag/Nest/operation/nest_get_nodes_by_node_collection","tag/Nest/operation/nest_get_node_ids_by_node_collection","tag/Nest/operation/nest_get_spikes_by_node_collection","tag/Nest/operation/nest_get_nodes","tag/Nest/operation/nest_get_node_ids","tag/Nest/operation/nest_get_node_by_id","tag/Nest/operation/nest_get_simulation_time_info","tag/Nest/operation/nest_get_spikerecorders","tag/Nest/operation/nest_get_spikedetectors","tag/Nest/operation/nest_get_spikes_by_spikerecorder","tag/Nest/operation/nest_get_spikes_by_spikedetector","tag/Nest/operation/nest_get_spikes","tag/General","tag/General/operation/get_version"],"index":{"version":"2.3.9","fields":["title","description"],"fieldVectors":[["title/0",[0,0.425,1,0.775,2,0.838,3,0.912,4,1.113,5,0.67,6,0.585,7,0.514,8,0.585]],["description/0",[9,3.818,10,3.818,11,3.818,12,3.818,13,3.818,14,3.818,15,3.818,16,3.818,17,3.818,18,3.818,19,3.818,20,3.818,21,3.386,22,5.033,23,5.033,24,3.818,25,5.033,26,4.267,27,5.033,28,3.818,29,3.818,30,3.818]],["title/1",[31,4.326]],["description/1",[0,1.206,3,1.133,4,2.763,5,1.663,21,1.244,26,1.568,32,1.041,33,1.849,34,3.916,35,1.849,36,2.233,37,1.568,38,0.931,39,1.243,40,1.849,41,3.134,42,3.581,43,1.382,44,1.849,45,1.849,46,1.849,47,2.508,48,2.958,49,1.133,50,2.958,51,1.382,52,1.382,53,1.849,54,0.962,55,1.133,56,1.382,57,1.244,58,1.133,59,1.849,60,1.849,61,1.849,62,1.382,63,1.382,64,2.958,65,1.849,66,1.849,67,1.849,68,1.568,69,1.243,70,1.849,71,1.849,72,1.568,73,1.568,74,1.849,75,1.568,76,1.849,77,1.849,78,1.568,79,1.568,80,1.849,81,1.382,82,1.568,83,1.849,84,1.849,85,1.849,86,1.244,87,1.849,88,1.849,89,1.849,90,1.849,91,1.849,92,1.849,93,1.849,94,1.244,95,0.893,96,1.568,97,1.568,98,1.041,99,1.382,100,1.849,101,1.041,102,1.382,103,0.267,104,1.849,105,1.568,106,1.849,107,1.849]],["title/2",[108,3.668]],["description/2",[0,1.119,2,0.767,3,0.835,5,2.14,6,0.536,7,0.47,8,0.536,21,0.917,32,1.296,34,2.532,36,1.779,37,1.951,38,1.027,39,0.967,42,1.951,49,0.835,51,1.019,52,1.019,54,0.709,55,0.835,56,1.019,72,1.155,73,1.155,78,1.951,79,1.155,81,1.019,82,1.155,94,1.548,95,0.658,96,1.155,97,1.155,98,0.767,99,1.72,101,1.296,102,1.019,103,0.506,108,2.532,109,1.363,110,1.363,111,1.41,112,1.363,113,1.363,114,1.363,115,1.548,116,2.301,117,2.301,118,1.197,119,1.296,120,1.363,121,1.363,122,2.301,123,0.917,124,1.363,125,1.019,126,1.155,127,2.301,128,1.363,129,1.363,130,1.363,131,1.363,132,1.363,133,2.301,134,2.301,135,2.301,136,1.363,137,1.363,138,1.363,139,1.363,140,1.363,141,1.035,142,1.363,143,1.363,144,1.155,145,1.363,146,2.301,147,1.363,148,1.363,149,1.363,150,1.951,151,1.363,152,0.365,153,0.767,154,1.363,155,1.155,156,1.363,157,2.301,158,1.72,159,0.365,160,1.363,161,1.363,162,1.363,163,1.363,164,1.155,165,1.019,166,1.155,167,1.363,168,1.363,169,2.986,170,1.019,171,1.363,172,1.035,173,1.363,174,1.155,175,1.363,176,1.363,177,1.363,178,1.363,179,1.363,180,0.709,181,1.363,182,0.767,183,1.363,184,1.363,185,1.363,186,1.363,187,1.363,188,1.363]],["title/3",[189,2.91]],["description/3",[54,2.676,58,3.151,69,2.16,190,5.142,191,3.459,192,5.142]],["title/4",[69,1.468,193,2.962]],["description/4",[0,0.929,1,3.305,5,1.285,6,0.696,7,0.611,8,0.696,32,1.335,36,0.696,38,0.87,39,0.996,41,0.853,43,1.323,51,0.752,54,0.523,55,0.616,58,0.616,62,0.752,69,1.508,75,0.853,94,0.677,95,0.486,98,0.997,102,0.752,103,0.342,105,0.853,111,0.616,119,1.335,123,1.191,150,0.853,158,0.752,165,0.752,180,0.523,182,0.566,191,2.913,193,4.207,194,4.683,195,1.501,196,1.006,197,1.006,198,1.006,199,1.006,200,1.006,201,1.006,202,1.006,203,2.371,204,1.006,205,1.006,206,2.896,207,2.371,208,1.006,209,1.006,210,1.006,211,1.006,212,1.006,213,1.77,214,2.01,215,1.77,216,1.006,217,0.853,218,1.006,219,2.189,220,1.006,221,1.006,222,1.006,223,1.006,224,1.006,225,0.306,226,1.323,227,0.853,228,1.006,229,2.421,230,1.006,231,1.501,232,1.006,233,1.006,234,1.006,235,1.006,236,1.501,237,0.853,238,1.006,239,0.853,240,0.853,241,1.006,242,1.006,243,1.006,244,1.006,245,1.006,246,1.77,247,1.006,248,1.006,249,1.006,250,1.085,251,1.006,252,0.853,253,1.006,254,1.006,255,1.006,256,1.006,257,0.853,258,0.752,259,2.01,260,1.006,261,1.006,262,2.856,263,1.501,264,1.77,265,1.006,266,1.77,267,1.006,268,1.006,269,1.006,270,1.006,271,1.006,272,1.006,273,1.006,274,1.006,275,1.501,276,1.006,277,1.006,278,0.853,279,1.006,280,1.77,281,0.853,282,1.006]],["title/5",[191,2.35,283,3.494]],["description/5",[1,3.421,5,1.277,6,1.612,7,0.98,8,1.116,39,1.41,47,2.844,49,0.78,54,0.662,56,0.951,69,1.193,81,3.449,94,2.257,103,0.41,164,2.407,165,0.951,189,2.257,191,3.762,217,2.407,229,1.079,240,1.079,250,2.95,263,1.079,284,2.171,285,1.273,286,1.273,287,2.407,288,3.477,289,2.839,290,2.839,291,1.909,292,3.355,293,4.379,294,2.839,295,2.839,296,1.273,297,1.273,298,2.171,299,2.839,300,2.171,301,2.171,302,1.273,303,2.839,304,2.839,305,2.839,306,1.079,307,1.273,308,1.273,309,1.273,310,1.079,311,1.273,312,1.273,313,1.273,314,0.951,315,1.273,316,0.951,317,2.171,318,1.273,319,1.273,320,1.273,321,1.273,322,1.273]],["title/6",[0,0.836,38,0.528,170,2.19]],["description/6",[6,1.901,7,1.67,8,1.901,54,2.517,58,2.964,62,3.616,323,4.837,324,4.837,325,4.837,326,4.837]],["title/7",[6,1.373,95,1.688]],["description/7",[0,1.55,1,2.722,3,1.855,4,1.423,6,1.841,32,1.072,36,0.748,38,0.678,39,1.271,69,0.8,95,0.919,101,1.072,103,0.543,115,2.036,119,1.072,123,1.28,144,3.194,152,1.009,153,2.638,155,1.614,159,0.51,172,1.362,174,1.614,180,0.99,182,1.072,189,1.28,219,1.28,250,1.166,258,1.423,314,3.502,316,1.423,327,1.423,328,1.423,329,1.614,330,1.423,331,1.423,332,1.423,333,1.423,334,1.614,335,1.903,336,1.903,337,2.198,338,2.566,339,1.903,340,1.903,341,1.423,342,3.026,343,1.903,344,1.903,345,1.903,346,3.026,347,1.423,348,1.903,349,1.903,350,1.903,351,3.767,352,1.903,353,1.903,354,1.271,355,2.566,356,1.903,357,1.903,358,1.903,359,1.903]],["title/8",[8,1.373,95,1.688]],["description/8",[0,1.513,1,2.418,2,1.502,3,0.998,5,0.733,6,0.64,8,1.54,32,0.917,36,0.64,38,0.836,39,1.647,43,1.217,49,0.998,52,1.217,63,1.217,69,1.424,98,0.917,99,1.217,101,1.502,123,1.095,126,1.38,152,0.436,158,1.217,166,1.38,170,1.994,172,1.525,180,0.847,182,1.502,189,1.095,195,1.38,206,1.217,219,1.095,250,1.635,252,1.38,258,1.994,259,1.38,278,1.38,281,1.38,287,1.38,288,1.38,306,2.262,310,1.38,316,1.217,327,1.217,328,1.217,329,1.38,330,1.217,331,1.994,332,1.217,333,1.217,334,1.38,337,0.684,338,3.323,341,1.217,355,1.38,360,1.628,361,1.628,362,1.628,363,2.668,364,1.628,365,2.668,366,2.668,367,1.628,368,1.628,369,1.38,370,1.38,371,1.628,372,1.628,373,1.628,374,2.262,375,2.668,376,1.628,377,1.628,378,1.628,379,1.628,380,1.628,381,1.628,382,1.628,383,1.628,384,1.628,385,1.628,386,1.628,387,1.628,388,2.668,389,1.628,390,2.402,391,1.635,392,1.628,393,1.628,394,0.998,395,1.38,396,1.628,397,1.38,398,1.628]],["title/9",[7,1.206,95,1.688]],["description/9",[0,0.999,1,3.347,2,0.764,5,0.611,7,1.028,8,0.533,36,0.901,38,0.764,39,1.251,49,0.832,63,1.015,69,0.57,95,1.108,103,0.196,172,1.032,182,1.291,214,1.151,219,0.913,250,1.405,291,1.542,314,3.172,327,1.015,328,1.015,330,1.015,331,1.015,332,1.015,333,1.015,337,0.57,341,1.015,347,1.015,354,1.47,369,1.944,370,2.524,374,1.944,399,1.357,400,2.977,401,1.357,402,2.293,403,1.357,404,1.357,405,2.293,406,1.357,407,2.293,408,1.357,409,1.151,410,1.357,411,2.6,412,2.977,413,2.293,414,2.293,415,2.293,416,2.293,417,3.499,418,2.293,419,2.977,420,2.293,421,1.357,422,4.243,423,1.357,424,1.357,425,3.499,426,2.293,427,2.293,428,2.293,429,2.293,430,2.293,431,2.293,432,1.357,433,1.357,434,1.357,435,1.357,436,1.357,437,2.293,438,1.357,439,1.357,440,1.357,441,1.357,442,1.357,443,1.357,444,1.357,445,1.357,446,1.357,447,1.357,448,1.357,449,1.357,450,1.357]],["title/10",[0,0.72,5,1.135,103,0.364,291,1.697]],["description/10",[1,3.523,5,1.591,6,1.598,7,0.598,8,1.598,32,0.975,38,0.505,39,1.179,54,1.46,58,1.719,68,1.468,101,0.975,103,0.644,182,0.975,206,2.097,227,2.998,231,4.054,236,1.468,237,1.468,239,1.468,275,2.378,291,1.165,347,2.097,409,2.378,451,1.732,452,1.732,453,1.732,454,1.732,455,1.732,456,4.782,457,1.732,458,4.782,459,1.732,460,1.732,461,1.732,462,3.536,463,1.732,464,1.294,465,1.732,466,1.732,467,3.536,468,1.732,469,1.732,470,1.732,471,1.732,472,2.805,473,2.805,474,2.805,475,2.805,476,2.805]],["title/11",[7,1.494]],["description/11",[]],["title/12",[411,2.651]],["description/12",[0,1.381,7,1.67,36,1.901,118,2.517,159,1.296,172,2.176,354,2.032,411,2.964,477,4.101,478,4.837]],["title/13",[36,1.373,411,2.141]],["description/13",[0,1.341,7,1.622,36,2.257,118,2.445,159,1.259,172,2.114,337,1.974,354,1.974,411,2.879,477,3.983,479,4.698]],["title/14",[38,0.629,480,1.572]],["description/14",[0,1.285,7,1.555,38,0.811,55,2.76,115,3.029,118,2.911,159,1.499,354,1.892,464,3.366,480,2.026,481,3.818,482,4.503,483,4.503]],["title/15",[38,0.528,480,1.319,484,2.484]],["description/15",[0,1.285,7,1.555,38,0.811,55,2.76,115,3.029,118,2.911,159,1.499,354,1.892,464,3.366,481,3.818,484,3.818,485,4.503,486,4.503]],["title/16",[8,1.7]],["description/16",[]],["title/17",[38,0.629,390,2.141]],["description/17",[0,1.423,38,0.898,118,2.594,159,1.335,354,2.094,390,3.055,391,3.055,487,4.985]],["title/18",[36,1.373,390,2.141]],["description/18",[0,1.401,36,1.93,38,0.884,118,2.555,159,1.315,354,2.063,390,3.009,391,3.009,488,4.91]],["title/19",[152,1.159]],["description/19",[38,0.941,152,1.4,159,1.4,489,5.224,490,5.224]],["title/20",[394,2.651]],["description/20",[8,1.959,38,0.898,159,1.335,354,2.094,391,3.055,394,3.055,480,2.243,491,4.985]],["title/21",[394,2.141,492,2.962]],["description/21",[38,0.926,159,1.378,391,3.151,394,3.151,397,4.359,493,5.142]],["title/22",[6,1.7]],["description/22",[]],["title/23",[494,2.962,495,2.962]],["description/23",[6,2.021,225,1.564,494,4.359,495,4.359,496,4.359,497,5.142]],["title/24",[153,2.436]],["description/24",[103,0.668,153,3.205,159,1.241,172,2.084,180,2.41,225,1.408,354,1.946,395,3.926,480,2.084,498,2.237,499,1.599,500,4.631]],["title/25",[153,1.967,480,1.572]],["description/25",[21,3.459,153,2.895,180,2.676,225,1.564,480,2.314,501,5.142]],["title/26",[502,2.93,503,2.93,504,2.93]],["description/26",[505,5.582]],["title/27",[103,0.504,141,1.572]],["description/27",[69,1.892,103,0.878,111,2.76,141,2.864,159,1.206,225,1.369,498,2.176,499,1.555,506,4.503,507,4.503]],["title/28",[103,0.605,141,1.319]],["description/28",[103,0.858,141,2.243,225,1.516,498,2.408,508,4.226,509,3.055,510,4.985]],["title/29",[103,0.543,141,1.135,499,0.871]],["description/29",[103,0.858,141,2.243,225,1.516,498,2.408,499,1.721,508,4.226,511,4.985]],["title/30",[103,0.364,141,1.135,152,0.676,499,0.871]],["description/30",[38,0.789,103,0.632,141,1.972,152,1.61,225,1.333,337,1.841,512,2.948,513,4.383,514,2.948,515,3.715,516,3.715,517,2.686,518,3.715,519,3.715,520,4.383]],["title/31",[103,0.624]],["description/31",[38,0.941,103,0.754,111,3.202,225,1.589,521,5.224]],["title/32",[103,0.504,499,1.206]],["description/32",[38,0.911,103,0.73,111,3.102,225,1.539,498,2.446,499,1.748,522,5.062]],["title/33",[103,0.543,480,1.135,499,0.871]],["description/33",[103,0.754,225,1.589,480,2.351,509,3.202,523,5.224]],["title/34",[38,0.528,492,2.484,524,1.796]],["description/34",[38,0.884,180,2.555,225,1.493,496,4.163,524,3.009,525,4.91,526,4.91,527,4.91,528,4.91]],["title/35",[152,0.936,337,1.468]],["description/35",[2,2.85,39,2.127,98,2.85,152,1.356,172,2.278,337,2.127,529,4.292]],["title/36",[152,0.936,517,2.141]],["description/36",[2,2.684,39,2.003,69,2.003,98,2.684,152,1.277,172,2.145,517,2.921,529,4.041,530,4.767,531,4.767,532,4.767]],["title/37",[152,1.008,337,1.06,499,0.871]],["description/37",[57,2.694,86,3.493,103,0.831,119,2.255,125,2.994,152,1.544,159,1.073,225,1.218,337,1.683,498,1.935,499,1.383,509,2.455,512,2.694,514,3.493,524,3.532,533,4.006]],["title/38",[152,0.785,499,1.012,534,2.93]],["description/38",[57,2.694,86,3.493,103,0.831,119,2.255,125,2.994,152,1.544,159,1.073,225,1.218,498,1.935,499,1.383,509,2.455,512,2.694,514,3.493,517,2.455,524,3.532,535,4.006]],["title/39",[152,1.159]],["description/39",[57,2.539,86,3.36,103,0.808,119,2.125,152,1.596,159,1.011,225,1.148,337,1.586,498,1.823,499,1.303,509,2.313,512,2.539,514,3.36,515,3.2,516,3.2,517,2.313,518,3.2,519,3.2,524,3.431,536,3.774]],["title/40",[537,4.326]],["description/40",[]],["title/41",[226,3.234]],["description/41",[0,1.468,101,2.895,159,1.378,226,4.531,257,4.359]]],"invertedIndex":[["",{"_index":1,"title":{"0":{}},"description":{"4":{},"5":{},"7":{},"8":{},"9":{},"10":{}}}],["1",{"_index":54,"title":{},"description":{"1":{},"2":{},"3":{},"4":{},"5":{},"6":{},"10":{}}}],["2",{"_index":58,"title":{},"description":{"1":{},"3":{},"4":{},"6":{},"10":{}}}],["2020",{"_index":15,"title":{},"description":{"0":{}}}],["3",{"_index":62,"title":{},"description":{"1":{},"4":{},"6":{}}}],["500",{"_index":443,"title":{},"description":{"9":{}}}],["52056",{"_index":475,"title":{},"description":{"10":{}}}],["52056:52056",{"_index":232,"title":{},"description":{"4":{}}}],["785907",{"_index":29,"title":{},"description":{"0":{}}}],["9011",{"_index":476,"title":{},"description":{"10":{}}}],["945539",{"_index":24,"title":{},"description":{"0":{}}}],["a></cent",{"_index":188,"title":{},"description":{"2":{}}}],["abov",{"_index":332,"title":{},"description":{"7":{},"8":{},"9":{}}}],["access",{"_index":5,"title":{"0":{},"10":{}},"description":{"1":{},"2":{},"4":{},"5":{},"8":{},"9":{},"10":{}}}],["access-nod",{"_index":165,"title":{},"description":{"2":{},"4":{},"5":{}}}],["accessnod",{"_index":474,"title":{},"description":{"10":{}}}],["accord",{"_index":308,"title":{},"description":{"5":{}}}],["acquir",{"_index":35,"title":{},"description":{"1":{}}}],["act",{"_index":352,"title":{},"description":{"7":{}}}],["activ",{"_index":339,"title":{},"description":{"7":{}}}],["ad",{"_index":336,"title":{},"description":{"7":{}}}],["add",{"_index":278,"title":{},"description":{"4":{},"8":{}}}],["addit",{"_index":179,"title":{},"description":{"2":{}}}],["addition",{"_index":395,"title":{},"description":{"8":{},"24":{}}}],["advantag",{"_index":88,"title":{},"description":{"1":{}}}],["afterward",{"_index":341,"title":{},"description":{"7":{},"8":{},"9":{}}}],["against",{"_index":310,"title":{},"description":{"5":{},"8":{}}}],["aggreg",{"_index":116,"title":{},"description":{"2":{}}}],["agreement",{"_index":23,"title":{},"description":{"0":{}}}],["allow",{"_index":42,"title":{},"description":{"1":{},"2":{}}}],["alt=\"markdown",{"_index":133,"title":{},"description":{"2":{}}}],["analysi",{"_index":74,"title":{},"description":{"1":{}}}],["api",{"_index":101,"title":{},"description":{"1":{},"2":{},"7":{},"8":{},"10":{},"41":{}}}],["approach",{"_index":41,"title":{},"description":{"1":{},"4":{}}}],["arb::all_prob",{"_index":375,"title":{},"description":{"8":{}}}],["arb::cell_member_pred",{"_index":385,"title":{},"description":{"8":{}}}],["arb::context",{"_index":379,"title":{},"description":{"8":{}}}],["arb::recip",{"_index":382,"title":{},"description":{"8":{}}}],["arb::regular_schedule(1.0",{"_index":376,"title":{},"description":{"8":{}}}],["arb::schedul",{"_index":387,"title":{},"description":{"8":{}}}],["arb::simul",{"_index":384,"title":{},"description":{"8":{}}}],["arbor",{"_index":8,"title":{"0":{},"8":{},"16":{}},"description":{"2":{},"4":{},"5":{},"6":{},"8":{},"9":{},"10":{},"20":{}}}],["arbor-exampl",{"_index":247,"title":{},"description":{"4":{}}}],["arbor-modul",{"_index":240,"title":{},"description":{"4":{},"5":{}}}],["arbor/cel",{"_index":491,"title":{},"description":{"20":{}}}],["arbor/cellinfo",{"_index":493,"title":{},"description":{"21":{}}}],["arbor/prob",{"_index":487,"title":{},"description":{"17":{}}}],["arbor/probedata",{"_index":488,"title":{},"description":{"18":{}}}],["arbor/spik",{"_index":490,"title":{},"description":{"19":{}}}],["arbor](https://arbor-sim.org",{"_index":177,"title":{},"description":{"2":{}}}],["architectur",{"_index":108,"title":{"2":{}},"description":{"2":{}}}],["assum",{"_index":328,"title":{},"description":{"7":{},"8":{},"9":{}}}],["avail",{"_index":172,"title":{},"description":{"2":{},"7":{},"8":{},"9":{},"12":{},"13":{},"24":{},"35":{},"36":{}}}],["backend",{"_index":338,"title":{},"description":{"7":{},"8":{}}}],["base",{"_index":277,"title":{},"description":{"4":{}}}],["baseurl",{"_index":458,"title":{},"description":{"10":{}}}],["bash",{"_index":292,"title":{},"description":{"5":{}}}],["befor",{"_index":370,"title":{},"description":{"8":{},"9":{}}}],["begin",{"_index":526,"title":{},"description":{"34":{}}}],["below",{"_index":158,"title":{},"description":{"2":{},"4":{},"8":{}}}],["binari",{"_index":249,"title":{},"description":{"4":{}}}],["binary.<br",{"_index":471,"title":{},"description":{"10":{}}}],["boilerpl",{"_index":439,"title":{},"description":{"9":{}}}],["bottleneck",{"_index":60,"title":{},"description":{"1":{}}}],["br",{"_index":275,"title":{},"description":{"4":{},"10":{}}}],["brain",{"_index":26,"title":{},"description":{"0":{},"1":{}}}],["brain](https://www.thevirtualbrain.org/tvb/zwei",{"_index":178,"title":{},"description":{"2":{}}}],["build",{"_index":191,"title":{"5":{}},"description":{"3":{},"4":{},"5":{}}}],["c",{"_index":287,"title":{},"description":{"5":{},"8":{}}}],["call",{"_index":422,"title":{},"description":{"9":{}}}],["case",{"_index":209,"title":{},"description":{"4":{}}}],["cd",{"_index":293,"title":{},"description":{"5":{}}}],["cell",{"_index":394,"title":{"20":{},"21":{}},"description":{"8":{},"20":{},"21":{}}}],["cell_member_pred",{"_index":389,"title":{},"description":{"8":{}}}],["cell_pr",{"_index":386,"title":{},"description":{"8":{}}}],["center;\"/></cent",{"_index":137,"title":{},"description":{"2":{}}}],["center><a",{"_index":184,"title":{},"description":{"2":{}}}],["center><img",{"_index":131,"title":{},"description":{"2":{}}}],["center>figur",{"_index":138,"title":{},"description":{"2":{}}}],["central",{"_index":114,"title":{},"description":{"2":{}}}],["chang",{"_index":233,"title":{},"description":{"4":{}}}],["clone",{"_index":284,"title":{},"description":{"5":{}}}],["close",{"_index":437,"title":{},"description":{"9":{}}}],["cmake",{"_index":288,"title":{},"description":{"5":{},"8":{}}}],["cmakelist",{"_index":360,"title":{},"description":{"8":{}}}],["code",{"_index":369,"title":{},"description":{"8":{},"9":{}}}],["collect",{"_index":141,"title":{"27":{},"28":{},"29":{},"30":{}},"description":{"2":{},"27":{},"28":{},"29":{},"30":{}}}],["compat",{"_index":200,"title":{},"description":{"4":{}}}],["compil",{"_index":316,"title":{},"description":{"5":{},"7":{},"8":{}}}],["compilation.<br",{"_index":334,"title":{},"description":{"7":{},"8":{}}}],["complet",{"_index":63,"title":{},"description":{"1":{},"8":{},"9":{}}}],["compose](https://docs.docker.com/compos",{"_index":198,"title":{},"description":{"4":{}}}],["comput",{"_index":149,"title":{},"description":{"2":{}}}],["config",{"_index":452,"title":{},"description":{"10":{}}}],["config.{toml,yaml",{"_index":468,"title":{},"description":{"10":{}}}],["configur",{"_index":291,"title":{"10":{}},"description":{"5":{},"9":{},"10":{}}}],["connect",{"_index":354,"title":{},"description":{"7":{},"9":{},"12":{},"13":{},"14":{},"15":{},"17":{},"18":{},"20":{},"24":{}}}],["consist",{"_index":109,"title":{},"description":{"2":{}}}],["const",{"_index":381,"title":{},"description":{"8":{}}}],["constraint",{"_index":53,"title":{},"description":{"1":{}}}],["consum",{"_index":71,"title":{},"description":{"1":{}}}],["contact",{"_index":107,"title":{},"description":{"1":{}}}],["contain",{"_index":219,"title":{},"description":{"4":{},"7":{},"8":{},"9":{}}}],["container",{"_index":201,"title":{},"description":{"4":{}}}],["context",{"_index":89,"title":{},"description":{"1":{}}}],["convien",{"_index":128,"title":{},"description":{"2":{}}}],["correct",{"_index":348,"title":{},"description":{"7":{}}}],["correspond",{"_index":465,"title":{},"description":{"10":{}}}],["coupl",{"_index":429,"title":{},"description":{"9":{}}}],["cpm](https://github.com/cpm-cmake/cpm.cmak",{"_index":289,"title":{},"description":{"5":{}}}],["cpp",{"_index":366,"title":{},"description":{"8":{}}}],["creat",{"_index":144,"title":{},"description":{"2":{},"7":{}}}],["ctx",{"_index":380,"title":{},"description":{"8":{}}}],["curl",{"_index":222,"title":{},"description":{"4":{}}}],["current",{"_index":496,"title":{},"description":{"23":{},"34":{}}}],["data",{"_index":36,"title":{"13":{},"18":{}},"description":{"1":{},"2":{},"4":{},"7":{},"8":{},"9":{},"12":{},"13":{},"18":{}}}],["dataformat",{"_index":92,"title":{},"description":{"1":{}}}],["datapoint",{"_index":151,"title":{},"description":{"2":{}}}],["default",{"_index":396,"title":{},"description":{"8":{}}}],["depend",{"_index":81,"title":{},"description":{"1":{},"2":{},"5":{}}}],["depends_on",{"_index":246,"title":{},"description":{"4":{}}}],["deploy",{"_index":257,"title":{},"description":{"4":{},"41":{}}}],["deprec",{"_index":530,"title":{},"description":{"36":{}}}],["describ",{"_index":331,"title":{},"description":{"7":{},"8":{},"9":{}}}],["descript",{"_index":451,"title":{},"description":{"10":{}}}],["design",{"_index":82,"title":{},"description":{"1":{},"2":{}}}],["detector",{"_index":517,"title":{"36":{}},"description":{"30":{},"36":{},"38":{},"39":{}}}],["develop",{"_index":70,"title":{},"description":{"1":{}}}],["devic",{"_index":351,"title":{},"description":{"7":{}}}],["differ",{"_index":150,"title":{},"description":{"2":{},"4":{}}}],["directori",{"_index":470,"title":{},"description":{"10":{}}}],["disk",{"_index":48,"title":{},"description":{"1":{}}}],["distribut",{"_index":122,"title":{},"description":{"2":{}}}],["docker",{"_index":193,"title":{"4":{}},"description":{"4":{}}}],["docker-compos",{"_index":207,"title":{},"description":{"4":{}}}],["docker/simulators/dockerfile_arbor",{"_index":282,"title":{},"description":{"4":{}}}],["docker](#using-dock",{"_index":190,"title":{},"description":{"3":{}}}],["dockerfil",{"_index":262,"title":{},"description":{"4":{}}}],["dockerfile_accessnod",{"_index":266,"title":{},"description":{"4":{}}}],["dockerfile_arbor",{"_index":270,"title":{},"description":{"4":{}}}],["dockerfile_arborringexampl",{"_index":267,"title":{},"description":{"4":{}}}],["dockerfile_nest",{"_index":271,"title":{},"description":{"4":{}}}],["dockerfile_nestexampl",{"_index":268,"title":{},"description":{"4":{}}}],["dockerfile_tvb",{"_index":272,"title":{},"description":{"4":{}}}],["dockerfile_tvbexampl",{"_index":269,"title":{},"description":{"4":{}}}],["document",{"_index":166,"title":{},"description":{"2":{},"8":{}}}],["documentation](https://nest-simulator.readthedocs.io/en/master/installation/index.html",{"_index":309,"title":{},"description":{"5":{}}}],["download",{"_index":217,"title":{},"description":{"4":{},"5":{}}}],["duplic",{"_index":519,"title":{},"description":{"30":{},"39":{}}}],["dure",{"_index":290,"title":{},"description":{"5":{}}}],["dwith-nest=nest_install_path/bin/nest-config",{"_index":312,"title":{},"description":{"5":{}}}],["e.g",{"_index":123,"title":{},"description":{"2":{},"4":{},"7":{},"8":{}}}],["each",{"_index":210,"title":{},"description":{"4":{}}}],["earli",{"_index":76,"title":{},"description":{"1":{}}}],["ease-to-integr",{"_index":83,"title":{},"description":{"1":{}}}],["easi",{"_index":96,"title":{},"description":{"1":{},"2":{}}}],["easili",{"_index":143,"title":{},"description":{"2":{}}}],["easy-to-us",{"_index":84,"title":{},"description":{"1":{}}}],["embed",{"_index":170,"title":{"6":{}},"description":{"2":{},"8":{}}}],["enabl",{"_index":3,"title":{"0":{}},"description":{"1":{},"2":{},"7":{},"8":{}}}],["encod",{"_index":160,"title":{},"description":{"2":{}}}],["end",{"_index":527,"title":{},"description":{"34":{}}}],["endpoint",{"_index":115,"title":{},"description":{"2":{},"7":{},"14":{},"15":{}}}],["engin",{"_index":202,"title":{},"description":{"4":{}}}],["engine](https://www.docker.com",{"_index":197,"title":{},"description":{"4":{}}}],["env",{"_index":454,"title":{},"description":{"10":{}}}],["environ",{"_index":236,"title":{},"description":{"4":{},"10":{}}}],["european",{"_index":12,"title":{},"description":{"0":{}}}],["even",{"_index":121,"title":{},"description":{"2":{}}}],["exampl",{"_index":206,"title":{},"description":{"4":{},"8":{},"10":{}}}],["examples/dockerfile_",{"_index":276,"title":{},"description":{"4":{}}}],["exist",{"_index":175,"title":{},"description":{"2":{}}}],["f",{"_index":215,"title":{},"description":{"4":{}}}],["favourit",{"_index":221,"title":{},"description":{"4":{}}}],["fetch",{"_index":477,"title":{},"description":{"12":{},"13":{}}}],["file",{"_index":68,"title":{},"description":{"1":{},"10":{}}}],["file.<br",{"_index":364,"title":{},"description":{"8":{}}}],["filter",{"_index":126,"title":{},"description":{"2":{},"8":{}}}],["final",{"_index":436,"title":{},"description":{"9":{}}}],["finish",{"_index":50,"title":{},"description":{"1":{}}}],["first",{"_index":49,"title":{},"description":{"1":{},"2":{},"5":{},"8":{},"9":{}}}],["follow",{"_index":182,"title":{},"description":{"2":{},"4":{},"7":{},"8":{},"9":{},"10":{}}}],["found",{"_index":181,"title":{},"description":{"2":{}}}],["four",{"_index":218,"title":{},"description":{"4":{}}}],["framework",{"_index":16,"title":{},"description":{"0":{}}}],["full",{"_index":157,"title":{},"description":{"2":{}}}],["function",{"_index":433,"title":{},"description":{"9":{}}}],["fund",{"_index":11,"title":{},"description":{"0":{}}}],["further",{"_index":55,"title":{},"description":{"1":{},"2":{},"4":{},"14":{},"15":{}}}],["gener",{"_index":537,"title":{"40":{}},"description":{}}],["git",{"_index":285,"title":{},"description":{"5":{}}}],["given",{"_index":512,"title":{},"description":{"30":{},"37":{},"38":{},"39":{}}}],["go",{"_index":45,"title":{},"description":{"1":{}}}],["goal",{"_index":31,"title":{"1":{}},"description":{}}],["grant",{"_index":22,"title":{},"description":{"0":{}}}],["here",{"_index":235,"title":{},"description":{"4":{}}}],["heunint",{"_index":431,"title":{},"description":{"9":{}}}],["horizon",{"_index":14,"title":{},"description":{"0":{}}}],["href=\"figures/poster.pdf\"><img",{"_index":185,"title":{},"description":{"2":{}}}],["http",{"_index":99,"title":{},"description":{"1":{},"2":{},"8":{}}}],["httpbackend(const",{"_index":378,"title":{},"description":{"8":{}}}],["https://github.com/arbor-sim/arbor",{"_index":307,"title":{},"description":{"5":{}}}],["https://github.com/crowcpp/crow",{"_index":305,"title":{},"description":{"5":{}}}],["https://github.com/gabime/spdlog",{"_index":299,"title":{},"description":{"5":{}}}],["https://github.com/google/flatbuff",{"_index":300,"title":{},"description":{"5":{}}}],["https://github.com/ijl/orjson",{"_index":321,"title":{},"description":{"5":{}}}],["https://github.com/jbeder/yaml-cpp",{"_index":296,"title":{},"description":{"5":{}}}],["https://github.com/libcpr/cpr",{"_index":297,"title":{},"description":{"5":{}}}],["https://github.com/marzer/tomlplusplu",{"_index":301,"title":{},"description":{"5":{}}}],["https://github.com/nest/nest-simul",{"_index":313,"title":{},"description":{"5":{}}}],["https://github.com/numpy/numpi",{"_index":322,"title":{},"description":{"5":{}}}],["https://github.com/olivierldff/asio.cmak",{"_index":302,"title":{},"description":{"5":{}}}],["https://github.com/tartanllama/opt",{"_index":303,"title":{},"description":{"5":{}}}],["https://github.com/tencent/rapidjson",{"_index":304,"title":{},"description":{"5":{}}}],["https://github.com/vrgrouprwth/insite.git",{"_index":286,"title":{},"description":{"5":{}}}],["https://github.com/zaphoyd/websocketpp",{"_index":298,"title":{},"description":{"5":{}}}],["human",{"_index":25,"title":{},"description":{"0":{}}}],["icon",{"_index":135,"title":{},"description":{"2":{}}}],["id",{"_index":499,"title":{"29":{},"30":{},"32":{},"33":{},"37":{},"38":{}},"description":{"24":{},"27":{},"29":{},"32":{},"37":{},"38":{},"39":{}}}],["imag",{"_index":194,"title":{},"description":{"4":{}}}],["images](#builddockerimag",{"_index":205,"title":{},"description":{"4":{}}}],["images](#using-pre-built-imag",{"_index":204,"title":{},"description":{"4":{}}}],["import",{"_index":400,"title":{},"description":{"9":{}}}],["in-situ",{"_index":145,"title":{},"description":{"2":{}}}],["in-transit",{"_index":4,"title":{"0":{}},"description":{"1":{},"7":{}}}],["includ",{"_index":365,"title":{},"description":{"8":{}}}],["info",{"_index":492,"title":{"21":{},"34":{}},"description":{}}],["inform",{"_index":180,"title":{},"description":{"2":{},"4":{},"7":{},"8":{},"24":{},"25":{},"34":{}}}],["initi",{"_index":406,"title":{},"description":{"9":{}}}],["innov",{"_index":19,"title":{},"description":{"0":{}}}],["insight",{"_index":77,"title":{},"description":{"1":{}}}],["insit",{"_index":0,"title":{"0":{},"6":{},"10":{}},"description":{"1":{},"2":{},"4":{},"7":{},"8":{},"9":{},"12":{},"13":{},"14":{},"15":{},"17":{},"18":{},"41":{}}}],["insite'",{"_index":102,"title":{},"description":{"1":{},"2":{},"4":{}}}],["insite-access-nod",{"_index":229,"title":{},"description":{"4":{},"5":{}}}],["insite-arbor",{"_index":306,"title":{},"description":{"5":{},"8":{}}}],["insite-arbor-exampl",{"_index":473,"title":{},"description":{"10":{}}}],["insite-en",{"_index":258,"title":{},"description":{"4":{},"7":{},"8":{}}}],["insite-nest-exampl",{"_index":472,"title":{},"description":{"10":{}}}],["insite-nest-modul",{"_index":238,"title":{},"description":{"4":{}}}],["insite/arbor/pipeline_backend.h",{"_index":367,"title":{},"description":{"8":{}}}],["insite::httpbackend",{"_index":371,"title":{},"description":{"8":{}}}],["insite_access_node_port",{"_index":460,"title":{},"description":{"10":{}}}],["insite_access_node_url",{"_index":245,"title":{},"description":{"4":{}}}],["insite_access_node_wsport",{"_index":463,"title":{},"description":{"10":{}}}],["insite_arbor_base_url",{"_index":239,"title":{},"description":{"4":{},"10":{}}}],["insite_arbor_num_nod",{"_index":459,"title":{},"description":{"10":{}}}],["insite_backend(context",{"_index":372,"title":{},"description":{"8":{}}}],["insite_monitor_wrapp",{"_index":404,"title":{},"description":{"9":{}}}],["insite_multimet",{"_index":344,"title":{},"description":{"7":{}}}],["insite_nest_base_url",{"_index":237,"title":{},"description":{"4":{},"10":{}}}],["insite_nest_num_nod",{"_index":457,"title":{},"description":{"10":{}}}],["insite_raw",{"_index":419,"title":{},"description":{"9":{}}}],["insite_spati",{"_index":417,"title":{},"description":{"9":{}}}],["insite_spike_record",{"_index":342,"title":{},"description":{"7":{}}}],["insite_websocketmanag",{"_index":401,"title":{},"description":{"9":{}}}],["insite_ws_manag",{"_index":407,"title":{},"description":{"9":{}}}],["insite_ws_manager.clos",{"_index":450,"title":{},"description":{"9":{}}}],["insite_ws_manager.connect",{"_index":441,"title":{},"description":{"9":{}}}],["insite_ws_manager.send_end_sim",{"_index":449,"title":{},"description":{"9":{}}}],["insite_ws_manager.send_sim_info(sim",{"_index":445,"title":{},"description":{"9":{}}}],["insite_ws_manager.send_start_sim",{"_index":444,"title":{},"description":{"9":{}}}],["insitemonitorwrapp",{"_index":405,"title":{},"description":{"9":{}}}],["insiteopcod",{"_index":403,"title":{},"description":{"9":{}}}],["insitewebsocketmanag",{"_index":402,"title":{},"description":{"9":{}}}],["inspect",{"_index":481,"title":{},"description":{"14":{},"15":{}}}],["instal",{"_index":189,"title":{"3":{}},"description":{"5":{},"7":{},"8":{}}}],["installation.<br",{"_index":399,"title":{},"description":{"9":{}}}],["installed.<br",{"_index":199,"title":{},"description":{"4":{}}}],["instanc",{"_index":118,"title":{},"description":{"2":{},"12":{},"13":{},"14":{},"15":{},"17":{},"18":{}}}],["instead.<br",{"_index":531,"title":{},"description":{"36":{}}}],["integr",{"_index":95,"title":{"7":{},"8":{},"9":{}},"description":{"1":{},"2":{},"4":{},"7":{},"9":{}}}],["integration](#arborintegr",{"_index":324,"title":{},"description":{"6":{}}}],["integration](#nestintegr",{"_index":323,"title":{},"description":{"6":{}}}],["integrations](#tvbintegr",{"_index":325,"title":{},"description":{"6":{}}}],["involv",{"_index":315,"title":{},"description":{"5":{}}}],["j",{"_index":295,"title":{},"description":{"5":{}}}],["json",{"_index":161,"title":{},"description":{"2":{}}}],["kernel",{"_index":494,"title":{"23":{}},"description":{"23":{}}}],["key",{"_index":453,"title":{},"description":{"10":{}}}],["knowledg",{"_index":146,"title":{},"description":{"2":{}}}],["l",{"_index":223,"title":{},"description":{"4":{}}}],["languag",{"_index":163,"title":{},"description":{"2":{}}}],["larg",{"_index":67,"title":{},"description":{"1":{}}}],["layer",{"_index":110,"title":{},"description":{"2":{}}}],["lead",{"_index":66,"title":{},"description":{"1":{}}}],["length",{"_index":442,"title":{},"description":{"9":{}}}],["level",{"_index":140,"title":{},"description":{"2":{}}}],["link",{"_index":252,"title":{},"description":{"4":{},"8":{}}}],["link](https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-access-nod",{"_index":256,"title":{},"description":{"4":{}}}],["link](https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-arbor",{"_index":253,"title":{},"description":{"4":{}}}],["link](https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-nest",{"_index":254,"title":{},"description":{"4":{}}}],["link](https://docker-registry.ebrains.eu/harbor/projects/60/repositories/insite-tvb",{"_index":255,"title":{},"description":{"4":{}}}],["list",{"_index":498,"title":{},"description":{"24":{},"27":{},"28":{},"29":{},"32":{},"37":{},"38":{},"39":{}}}],["local",{"_index":234,"title":{},"description":{"4":{}}}],["localhost:52056",{"_index":220,"title":{},"description":{"4":{}}}],["localhost:52056/vers",{"_index":224,"title":{},"description":{"4":{}}}],["locat",{"_index":264,"title":{},"description":{"4":{}}}],["machin",{"_index":65,"title":{},"description":{"1":{}}}],["made",{"_index":363,"title":{},"description":{"8":{}}}],["main",{"_index":52,"title":{},"description":{"1":{},"2":{},"8":{}}}],["make",{"_index":94,"title":{},"description":{"1":{},"2":{},"4":{},"5":{}}}],["manual",{"_index":333,"title":{},"description":{"7":{},"8":{},"9":{}}}],["mean",{"_index":120,"title":{},"description":{"2":{}}}],["measur",{"_index":503,"title":{"26":{}},"description":{}}],["merg",{"_index":516,"title":{},"description":{"30":{},"39":{}}}],["middlewar",{"_index":33,"title":{},"description":{"1":{}}}],["mkdir",{"_index":294,"title":{},"description":{"5":{}}}],["model",{"_index":506,"title":{},"description":{"27":{}}}],["modul",{"_index":250,"title":{},"description":{"4":{},"5":{},"7":{},"8":{},"9":{}}}],["mon_raw",{"_index":413,"title":{},"description":{"9":{}}}],["mon_spat",{"_index":415,"title":{},"description":{"9":{}}}],["monitor",{"_index":411,"title":{"12":{},"13":{}},"description":{"9":{},"12":{},"13":{}}}],["monitors.raw",{"_index":414,"title":{},"description":{"9":{}}}],["monitors.spatialaverag",{"_index":416,"title":{},"description":{"9":{}}}],["monitorwrapp",{"_index":423,"title":{},"description":{"9":{}}}],["monitorwrapper(mon_raw,insite_ws_manag",{"_index":420,"title":{},"description":{"9":{}}}],["monitorwrapper(mon_spat,insite_ws_manag",{"_index":418,"title":{},"description":{"9":{}}}],["monster",{"_index":134,"title":{},"description":{"2":{}}}],["mpi",{"_index":124,"title":{},"description":{"2":{}}}],["multi-nod",{"_index":129,"title":{},"description":{"2":{}}}],["multimet",{"_index":153,"title":{"24":{},"25":{}},"description":{"2":{},"7":{},"24":{},"25":{}}}],["multimeterid",{"_index":504,"title":{"26":{}},"description":{}}],["multipl",{"_index":117,"title":{},"description":{"2":{}}}],["multiscal",{"_index":130,"title":{},"description":{"2":{}}}],["mutlimet",{"_index":502,"title":{"26":{}},"description":{}}],["name=\"arborintegration\"></a",{"_index":359,"title":{},"description":{"7":{}}}],["name=\"builddockerimages\"></a",{"_index":260,"title":{},"description":{"4":{}}}],["name=\"nestintegration\"></a",{"_index":326,"title":{},"description":{"6":{}}}],["name=\"tvbintegration\"></a",{"_index":398,"title":{},"description":{"8":{}}}],["nest",{"_index":6,"title":{"0":{},"7":{},"22":{}},"description":{"2":{},"4":{},"5":{},"6":{},"7":{},"8":{},"10":{},"23":{}}}],["nest'",{"_index":335,"title":{},"description":{"7":{}}}],["nest-exampl",{"_index":241,"title":{},"description":{"4":{}}}],["nest-modul",{"_index":311,"title":{},"description":{"5":{}}}],["nest.connect(nodes_ex",{"_index":356,"title":{},"description":{"7":{}}}],["nest.create(\"multimet",{"_index":345,"title":{},"description":{"7":{}}}],["nest.create(\"spike_record",{"_index":343,"title":{},"description":{"7":{}}}],["nest.install(\"insitemodul",{"_index":340,"title":{},"description":{"7":{}}}],["nest.setstatus(your_devic",{"_index":349,"title":{},"description":{"7":{}}}],["nest/kernelstatu",{"_index":497,"title":{},"description":{"23":{}}}],["nest/multimet",{"_index":500,"title":{},"description":{"24":{}}}],["nest/multimeters/{multimeterid",{"_index":501,"title":{},"description":{"25":{}}}],["nest/multimeters/{multimeterid}/attributes/{attributenam",{"_index":505,"title":{},"description":{"26":{}}}],["nest/nod",{"_index":521,"title":{},"description":{"31":{}}}],["nest/nodecollect",{"_index":507,"title":{},"description":{"27":{}}}],["nest/nodecollections/{nodecollectionid}/nod",{"_index":510,"title":{},"description":{"28":{}}}],["nest/nodecollections/{nodecollectionid}/nodes/id",{"_index":511,"title":{},"description":{"29":{}}}],["nest/nodecollections/{nodecollectionid}/spik",{"_index":520,"title":{},"description":{"30":{}}}],["nest/nodes/id",{"_index":522,"title":{},"description":{"32":{}}}],["nest/nodes/{nodeid",{"_index":523,"title":{},"description":{"33":{}}}],["nest/simulationtimeinfo",{"_index":528,"title":{},"description":{"34":{}}}],["nest/spik",{"_index":536,"title":{},"description":{"39":{}}}],["nest/spikedetector",{"_index":532,"title":{},"description":{"36":{}}}],["nest/spikedetectors/{spikedetectorid}/spik",{"_index":535,"title":{},"description":{"38":{}}}],["nest/spikerecord",{"_index":529,"title":{},"description":{"35":{},"36":{}}}],["nest/spikerecorders/{spikerecorderid}/spik",{"_index":533,"title":{},"description":{"37":{}}}],["nest](https://www.nest-simulator.org",{"_index":176,"title":{},"description":{"2":{}}}],["network",{"_index":155,"title":{},"description":{"2":{},"7":{}}}],["neural",{"_index":37,"title":{},"description":{"1":{},"2":{}}}],["neuron",{"_index":355,"title":{},"description":{"7":{},"8":{}}}],["new",{"_index":174,"title":{},"description":{"2":{},"7":{}}}],["next",{"_index":368,"title":{},"description":{"8":{}}}],["node",{"_index":103,"title":{"10":{},"27":{},"28":{},"29":{},"30":{},"31":{},"32":{},"33":{}},"description":{"1":{},"2":{},"4":{},"5":{},"7":{},"9":{},"10":{},"24":{},"27":{},"28":{},"29":{},"30":{},"31":{},"32":{},"33":{},"37":{},"38":{},"39":{}}}],["node.</cent",{"_index":142,"title":{},"description":{"2":{}}}],["node.<br",{"_index":273,"title":{},"description":{"4":{}}}],["non-invas",{"_index":173,"title":{},"description":{"2":{}}}],["nonetheless",{"_index":211,"title":{},"description":{"4":{}}}],["normal",{"_index":353,"title":{},"description":{"7":{}}}],["numberofnod",{"_index":456,"title":{},"description":{"10":{}}}],["occur",{"_index":489,"title":{},"description":{"19":{}}}],["off-the-shelf",{"_index":91,"title":{},"description":{"1":{}}}],["on",{"_index":125,"title":{},"description":{"2":{},"37":{},"38":{}}}],["option",{"_index":514,"title":{},"description":{"30":{},"37":{},"38":{},"39":{}}}],["oscil",{"_index":427,"title":{},"description":{"9":{}}}],["out",{"_index":61,"title":{},"description":{"1":{}}}],["overview",{"_index":397,"title":{},"description":{"8":{},"21":{}}}],["paradigm",{"_index":40,"title":{},"description":{"1":{}}}],["part",{"_index":111,"title":{},"description":{"2":{},"4":{},"27":{},"31":{},"32":{}}}],["pass",{"_index":448,"title":{},"description":{"9":{}}}],["pip",{"_index":317,"title":{},"description":{"5":{}}}],["pipelin",{"_index":2,"title":{"0":{}},"description":{"2":{},"8":{},"9":{},"35":{},"36":{}}}],["pipeline.<br",{"_index":358,"title":{},"description":{"7":{}}}],["pleas",{"_index":195,"title":{},"description":{"4":{},"8":{}}}],["plethora",{"_index":162,"title":{},"description":{"2":{}}}],["pluge",{"_index":168,"title":{},"description":{"2":{}}}],["plugin",{"_index":169,"title":{},"description":{"2":{}}}],["point",{"_index":106,"title":{},"description":{"1":{}}}],["port",{"_index":231,"title":{},"description":{"4":{},"10":{}}}],["possibl",{"_index":97,"title":{},"description":{"1":{},"2":{}}}],["poster:<br",{"_index":183,"title":{},"description":{"2":{}}}],["pre-built",{"_index":203,"title":{},"description":{"4":{}}}],["pre-instal",{"_index":251,"title":{},"description":{"4":{}}}],["present",{"_index":391,"title":{},"description":{"8":{},"17":{},"18":{},"20":{},"21":{}}}],["probe",{"_index":390,"title":{"17":{},"18":{}},"description":{"8":{},"17":{},"18":{}}}],["process",{"_index":56,"title":{},"description":{"1":{},"2":{},"5":{}}}],["programm",{"_index":17,"title":{},"description":{"0":{}}}],["project",{"_index":27,"title":{},"description":{"0":{}}}],["project/research",{"_index":9,"title":{},"description":{"0":{}}}],["properti",{"_index":480,"title":{"14":{},"15":{},"25":{},"33":{}},"description":{"14":{},"20":{},"24":{},"25":{},"33":{}}}],["protocol",{"_index":93,"title":{},"description":{"1":{}}}],["provid",{"_index":32,"title":{},"description":{"1":{},"2":{},"4":{},"7":{},"8":{},"10":{}}}],["public",{"_index":362,"title":{},"description":{"8":{}}}],["python",{"_index":314,"title":{},"description":{"5":{},"7":{},"9":{}}}],["queri",{"_index":98,"title":{},"description":{"1":{},"2":{},"4":{},"8":{},"35":{},"36":{}}}],["r",{"_index":319,"title":{},"description":{"5":{}}}],["rang",{"_index":86,"title":{},"description":{"1":{},"37":{},"38":{},"39":{}}}],["rate",{"_index":393,"title":{},"description":{"8":{}}}],["rcp",{"_index":383,"title":{},"description":{"8":{}}}],["receiv",{"_index":10,"title":{},"description":{"0":{}}}],["recip",{"_index":373,"title":{},"description":{"8":{}}}],["record",{"_index":337,"title":{"35":{},"37":{}},"description":{"7":{},"8":{},"9":{},"13":{},"30":{},"35":{},"37":{},"39":{}}}],["record_to\":\"insit",{"_index":350,"title":{},"description":{"7":{}}}],["refer",{"_index":259,"title":{},"description":{"4":{},"8":{}}}],["regist",{"_index":424,"title":{},"description":{"9":{}}}],["registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-access-nod",{"_index":230,"title":{},"description":{"4":{}}}],["registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-arbor-exampl",{"_index":248,"title":{},"description":{"4":{}}}],["registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-nest-exampl",{"_index":242,"title":{},"description":{"4":{}}}],["registry.git-ce.rwth-aachen.de/vr-vis/vr-group/in-situ-pipeline/insite/insite-tvb-exampl",{"_index":244,"title":{},"description":{"4":{}}}],["regular",{"_index":410,"title":{},"description":{"9":{}}}],["rel",{"_index":279,"title":{},"description":{"4":{}}}],["remov",{"_index":518,"title":{},"description":{"30":{},"39":{}}}],["repositori",{"_index":263,"title":{},"description":{"4":{},"5":{}}}],["repres",{"_index":104,"title":{},"description":{"1":{}}}],["request",{"_index":515,"title":{},"description":{"30":{},"39":{}}}],["requirements.txt",{"_index":320,"title":{},"description":{"5":{}}}],["research",{"_index":18,"title":{},"description":{"0":{}}}],["respect",{"_index":119,"title":{},"description":{"2":{},"4":{},"7":{},"37":{},"38":{},"39":{}}}],["respons",{"_index":171,"title":{},"description":{"2":{}}}],["rest",{"_index":100,"title":{},"description":{"1":{}}}],["retriev",{"_index":225,"title":{},"description":{"4":{},"23":{},"24":{},"25":{},"27":{},"28":{},"29":{},"30":{},"31":{},"32":{},"33":{},"34":{},"37":{},"38":{},"39":{}}}],["return",{"_index":159,"title":{},"description":{"2":{},"7":{},"12":{},"13":{},"14":{},"15":{},"17":{},"18":{},"19":{},"20":{},"21":{},"24":{},"27":{},"37":{},"38":{},"39":{},"41":{}}}],["root",{"_index":280,"title":{},"description":{"4":{}}}],["run",{"_index":43,"title":{},"description":{"1":{},"4":{},"8":{}}}],["same",{"_index":469,"title":{},"description":{"10":{}}}],["sampl",{"_index":392,"title":{},"description":{"8":{}}}],["save",{"_index":212,"title":{},"description":{"4":{}}}],["sched",{"_index":388,"title":{},"description":{"8":{}}}],["second",{"_index":167,"title":{},"description":{"2":{}}}],["section",{"_index":327,"title":{},"description":{"7":{},"8":{},"9":{}}}],["see",{"_index":156,"title":{},"description":{"2":{}}}],["send_end_sim",{"_index":435,"title":{},"description":{"9":{}}}],["send_sim_info(sim",{"_index":434,"title":{},"description":{"9":{}}}],["send_start_sim",{"_index":432,"title":{},"description":{"9":{}}}],["serv",{"_index":113,"title":{},"description":{"2":{}}}],["server",{"_index":112,"title":{},"description":{"2":{}}}],["servic",{"_index":228,"title":{},"description":{"4":{}}}],["set",{"_index":347,"title":{},"description":{"7":{},"9":{},"10":{}}}],["sga2",{"_index":30,"title":{},"description":{"0":{}}}],["sga3",{"_index":28,"title":{},"description":{"0":{}}}],["show",{"_index":438,"title":{},"description":{"9":{}}}],["signatur",{"_index":377,"title":{},"description":{"8":{}}}],["sim",{"_index":374,"title":{},"description":{"8":{},"9":{}}}],["sim(simulation_length=length",{"_index":447,"title":{},"description":{"9":{}}}],["sim.configur",{"_index":446,"title":{},"description":{"9":{}}}],["simul",{"_index":38,"title":{"6":{},"14":{},"15":{},"17":{},"34":{}},"description":{"1":{},"2":{},"4":{},"7":{},"8":{},"9":{},"10":{},"14":{},"15":{},"17":{},"18":{},"19":{},"20":{},"21":{},"30":{},"31":{},"32":{},"34":{}}}],["simulatiion",{"_index":90,"title":{},"description":{"1":{}}}],["simulation'",{"_index":147,"title":{},"description":{"2":{}}}],["simulation_info/<properti",{"_index":482,"title":{},"description":{"14":{}}}],["simulation_info/<property>/<properti",{"_index":485,"title":{},"description":{"15":{}}}],["simulator.simulator(model",{"_index":426,"title":{},"description":{"9":{}}}],["simulators/dockerfile_",{"_index":274,"title":{},"description":{"4":{}}}],["singl",{"_index":105,"title":{},"description":{"1":{},"4":{}}}],["some-name.yaml",{"_index":213,"title":{},"description":{"4":{}}}],["sourc",{"_index":283,"title":{"5":{}},"description":{}}],["source](#building-from-sourc",{"_index":192,"title":{},"description":{"3":{}}}],["specif",{"_index":21,"title":{},"description":{"0":{},"1":{},"2":{},"25":{}}}],["specifi",{"_index":509,"title":{},"description":{"28":{},"33":{},"37":{},"38":{},"39":{}}}],["speed",{"_index":59,"title":{},"description":{"1":{}}}],["spike",{"_index":152,"title":{"19":{},"30":{},"35":{},"36":{},"37":{},"38":{},"39":{}},"description":{"2":{},"7":{},"8":{},"19":{},"30":{},"35":{},"36":{},"37":{},"38":{},"39":{}}}],["spikedetector",{"_index":534,"title":{"38":{}},"description":{}}],["spikerecord",{"_index":346,"title":{},"description":{"7":{}}}],["src=\"figures/flow.png",{"_index":132,"title":{},"description":{"2":{}}}],["src=\"figures/poster.png",{"_index":186,"title":{},"description":{"2":{}}}],["start",{"_index":214,"title":{},"description":{"4":{},"9":{}}}],["statu",{"_index":495,"title":{"23":{}},"description":{"23":{}}}],["step",{"_index":513,"title":{},"description":{"30":{}}}],["stepsiz",{"_index":525,"title":{},"description":{"34":{}}}],["still",{"_index":44,"title":{},"description":{"1":{}}}],["store",{"_index":64,"title":{},"description":{"1":{}}}],["structur",{"_index":265,"title":{},"description":{"4":{}}}],["style=\"float",{"_index":136,"title":{},"description":{"2":{}}}],["style=\"height:400px",{"_index":187,"title":{},"description":{"2":{}}}],["subproperti",{"_index":484,"title":{"15":{}},"description":{"15":{}}}],["successfulli",{"_index":329,"title":{},"description":{"7":{},"8":{}}}],["such",{"_index":72,"title":{},"description":{"1":{},"2":{}}}],["sure",{"_index":196,"title":{},"description":{"4":{}}}],["syn_spec=\"excitatori",{"_index":357,"title":{},"description":{"7":{}}}],["system",{"_index":164,"title":{},"description":{"2":{},"5":{}}}],["take",{"_index":87,"title":{},"description":{"1":{}}}],["target_link_libraries(your_simul",{"_index":361,"title":{},"description":{"8":{}}}],["therefor",{"_index":281,"title":{},"description":{"4":{},"8":{}}}],["three",{"_index":208,"title":{},"description":{"4":{}}}],["through",{"_index":330,"title":{},"description":{"7":{},"8":{},"9":{}}}],["thu",{"_index":127,"title":{},"description":{"2":{}}}],["time",{"_index":524,"title":{"34":{}},"description":{"34":{},"37":{},"38":{},"39":{}}}],["toml",{"_index":467,"title":{},"description":{"10":{}}}],["tool",{"_index":75,"title":{},"description":{"1":{},"4":{}}}],["top",{"_index":139,"title":{},"description":{"2":{}}}],["topolog",{"_index":154,"title":{},"description":{"2":{}}}],["tradit",{"_index":46,"title":{},"description":{"1":{}}}],["tvb",{"_index":7,"title":{"0":{},"9":{},"11":{}},"description":{"2":{},"4":{},"5":{},"6":{},"9":{},"10":{},"12":{},"13":{},"14":{},"15":{}}}],["tvb-exampl",{"_index":243,"title":{},"description":{"4":{}}}],["tvb-modul",{"_index":318,"title":{},"description":{"5":{}}}],["tvb/monitor",{"_index":478,"title":{},"description":{"12":{}}}],["tvb/monitordata",{"_index":479,"title":{},"description":{"13":{}}}],["tvb/simulationinfo",{"_index":483,"title":{},"description":{"14":{}}}],["tvb/simulationinfo/{properti",{"_index":486,"title":{},"description":{"15":{}}}],["two",{"_index":51,"title":{},"description":{"1":{},"2":{},"4":{}}}],["under",{"_index":20,"title":{},"description":{"0":{}}}],["underli",{"_index":148,"title":{},"description":{"2":{}}}],["union’",{"_index":13,"title":{},"description":{"0":{}}}],["up",{"_index":216,"title":{},"description":{"4":{}}}],["url",{"_index":409,"title":{},"description":{"9":{},"10":{}}}],["us",{"_index":69,"title":{"4":{}},"description":{"1":{},"3":{},"4":{},"5":{},"7":{},"8":{},"9":{},"27":{},"36":{}}}],["user",{"_index":34,"title":{},"description":{"1":{},"2":{}}}],["usual",{"_index":421,"title":{},"description":{"9":{}}}],["valu",{"_index":464,"title":{},"description":{"10":{},"14":{},"15":{}}}],["var",{"_index":455,"title":{},"description":{"10":{}}}],["variabl",{"_index":466,"title":{},"description":{"10":{}}}],["version",{"_index":226,"title":{"41":{}},"description":{"4":{},"41":{}}}],["via",{"_index":39,"title":{},"description":{"1":{},"2":{},"4":{},"5":{},"7":{},"8":{},"9":{},"10":{},"35":{},"36":{}}}],["virtual",{"_index":79,"title":{},"description":{"1":{},"2":{}}}],["visual",{"_index":73,"title":{},"description":{"1":{},"2":{}}}],["websocket",{"_index":461,"title":{},"description":{"10":{}}}],["websocketmanager(address,9011",{"_index":440,"title":{},"description":{"9":{}}}],["websocketmanager(insite_access_node_url,9011",{"_index":408,"title":{},"description":{"9":{}}}],["websocketport",{"_index":462,"title":{},"description":{"10":{}}}],["what_to_watch",{"_index":425,"title":{},"description":{"9":{}}}],["white_matt",{"_index":428,"title":{},"description":{"9":{}}}],["white_matter_coupl",{"_index":430,"title":{},"description":{"9":{}}}],["whole",{"_index":57,"title":{},"description":{"1":{},"37":{},"38":{},"39":{}}}],["wide",{"_index":85,"title":{},"description":{"1":{}}}],["within",{"_index":508,"title":{},"description":{"28":{},"29":{}}}],["without",{"_index":78,"title":{},"description":{"1":{},"2":{}}}],["wrap",{"_index":412,"title":{},"description":{"9":{}}}],["written",{"_index":47,"title":{},"description":{"1":{},"5":{}}}],["yaml",{"_index":227,"title":{},"description":{"4":{},"10":{}}}],["yourself",{"_index":261,"title":{},"description":{"4":{}}}],["zero",{"_index":80,"title":{},"description":{"1":{}}}]],"pipeline":[]}},"options":{}};
var container = document.getElementById('redoc');
Redoc.hydrate(__redoc_state, container);