diff --git a/tests/test_active_learning.py b/tests/test_active_learning.py index 00f26b8555fcdd9c700dc7cc2fec2ba6ef40f51f..e045be5e0c629a647e9e308baf3150edd82265ff 100644 --- a/tests/test_active_learning.py +++ b/tests/test_active_learning.py @@ -1,21 +1,19 @@ +import os import pytest import numpy as np +import matplotlib.pyplot as plt from scipy import optimize from scipy.stats import norm, multivariate_normal, uniform -from psimpy.inference.active_learning import ActiveLearning -from psimpy.simulator.run_simulator import RunSimulator -from psimpy.simulator.mass_point_model import MassPointModel -from psimpy.sampler.latin import LHS -from psimpy.sampler.saltelli import Saltelli -from psimpy.emulator.robustgasp import ScalarGaSP, PPGaSP -from psimpy.inference.bayes_inference import GridEstimation -from psimpy.inference.bayes_inference import MetropolisHastingsEstimation -from psimpy.sampler.metropolis_hastings import MetropolisHastings -from scipy.stats import uniform, norm -from scipy import optimize from beartype.roar import BeartypeCallHintParamViolation -import matplotlib.pyplot as plt -import os +from psimpy.inference import ActiveLearning +from psimpy.simulator import RunSimulator +from psimpy.simulator import MassPointModel +from psimpy.sampler import LHS +from psimpy.sampler import Saltelli +from psimpy.emulator import ScalarGaSP, PPGaSP +from psimpy.inference import GridEstimation +from psimpy.inference import MetropolisHastingsEstimation +from psimpy.sampler import MetropolisHastings dir_test = os.path.abspath(os.path.join(__file__, '../')) diff --git a/tests/test_bayes_inference.py b/tests/test_bayes_inference.py index dacc2c3d9b4ca2114165d765426a98a91d5adbee..b1fdd35cc5cee22d50220df86e88955cfd1c5fb7 100644 --- a/tests/test_bayes_inference.py +++ b/tests/test_bayes_inference.py @@ -1,12 +1,12 @@ +import os import pytest +import itertools import numpy as np -from scipy.stats import norm, multivariate_normal, uniform -from psimpy.inference.bayes_inference import GridEstimation -from psimpy.inference.bayes_inference import MetropolisHastingsEstimation -from psimpy.sampler.metropolis_hastings import MetropolisHastings import matplotlib.pyplot as plt -import os -import itertools +from scipy.stats import norm, multivariate_normal, uniform +from psimpy.inference import GridEstimation +from psimpy.inference import MetropolisHastingsEstimation +from psimpy.sampler import MetropolisHastings dir_test = os.path.abspath(os.path.join(__file__, '../')) diff --git a/tests/test_latin.py b/tests/test_latin.py index 7dd3f283473e70fc7af9fd234b877428521dab91..ca35184ed98e2015d3f17fb3f3a9e9382e68bd7b 100644 --- a/tests/test_latin.py +++ b/tests/test_latin.py @@ -1,6 +1,6 @@ import pytest import numpy as np -from psimpy.sampler.latin import LHS +from psimpy.sampler import LHS from beartype.roar import BeartypeCallHintParamViolation @pytest.mark.parametrize( diff --git a/tests/test_mass_point_model.py b/tests/test_mass_point_model.py index 9381d3ce424a0f65b3ba97d89b2608225861ec40..30fd3ee6afc18ad86e0cf6d690fd286ef610ac16 100644 --- a/tests/test_mass_point_model.py +++ b/tests/test_mass_point_model.py @@ -1,7 +1,7 @@ -from psimpy.simulator.mass_point_model import MassPointModel -import numpy as np import os +import numpy as np import pytest +from psimpy.simulator import MassPointModel @pytest.mark.parametrize( "elevation, x0, y0", diff --git a/tests/test_metropolis_hastings.py b/tests/test_metropolis_hastings.py index f8bc3a4124f305e81f4a8e3a73c4b25d64e72e9b..996f4ca884af653a726ee03aaf3de6cd0a507f82 100644 --- a/tests/test_metropolis_hastings.py +++ b/tests/test_metropolis_hastings.py @@ -1,9 +1,9 @@ +import os import pytest import numpy as np -from scipy.stats import norm, multivariate_normal, uniform -from psimpy.sampler.metropolis_hastings import MetropolisHastings import matplotlib.pyplot as plt -import os +from scipy.stats import norm, multivariate_normal, uniform +from psimpy.sampler import MetropolisHastings @pytest.mark.parametrize( "ndim, init_state, f_sample, target, ln_target, bounds, f_density, symmetric", diff --git a/tests/test_ravaflow24.py b/tests/test_ravaflow24.py index fa7c5961ccaf95de0ec0672db014a0bd8d9271ec..cc04fe8283d575c0298a20c0a6fa4aecf1167838 100644 --- a/tests/test_ravaflow24.py +++ b/tests/test_ravaflow24.py @@ -1,7 +1,7 @@ -from psimpy.simulator.ravaflow24 import Ravaflow24Mixture -import numpy as np import os import pytest +import numpy as np +from psimpy.simulator import Ravaflow24Mixture @pytest.mark.parametrize( "dir_sim, conversion_control, curvature_control, surface_control, \ diff --git a/tests/test_robustgasp.py b/tests/test_robustgasp.py index 6e8af65352018dbb3559550a31fd73892fe9bcca..1b0113a36b5468325fa5e892f8710ea93db2958f 100644 --- a/tests/test_robustgasp.py +++ b/tests/test_robustgasp.py @@ -1,9 +1,10 @@ +import os import pytest import numpy as np -from psimpy.emulator.robustgasp import RobustGaSPBase, ScalarGaSP, PPGaSP -from beartype.roar import BeartypeCallHintParamViolation from rpy2.rinterface import NA -import os +from beartype.roar import BeartypeCallHintParamViolation +from psimpy.emulator import ScalarGaSP, PPGaSP +from psimpy.emulator.robustgasp import RobustGaSPBase @pytest.mark.parametrize( "ndim, zero_mean, nugget, nugget_est, range_par, method, prior_choice, \ diff --git a/tests/test_run_mass_point_model.py b/tests/test_run_mass_point_model.py index 310fcce2de46a77b5f619e7c313f302b781d4ceb..26d5a79580d3c96dc8b48fad37f605ff13957ac7 100644 --- a/tests/test_run_mass_point_model.py +++ b/tests/test_run_mass_point_model.py @@ -1,9 +1,9 @@ -from psimpy.simulator.run_simulator import RunSimulator -from psimpy.simulator.mass_point_model import MassPointModel import os -import numpy as np -import itertools import time +import itertools +import numpy as np +from psimpy.simulator import RunSimulator +from psimpy.simulator import MassPointModel def test_run_mass_point_model(): mpm = MassPointModel() diff --git a/tests/test_run_ravaflow24.py b/tests/test_run_ravaflow24.py index d2b34660909cf4e318c7e7f8da7c317261c29fae..940630cc01760fa79aa8502da82f89c4446953cd 100644 --- a/tests/test_run_ravaflow24.py +++ b/tests/test_run_ravaflow24.py @@ -1,9 +1,9 @@ -from psimpy.simulator.run_simulator import RunSimulator -from psimpy.simulator.ravaflow24 import Ravaflow24Mixture -import numpy as np -import itertools -import time import os +import time +import itertools +import numpy as np +from psimpy.simulator import RunSimulator +from psimpy.simulator import Ravaflow24Mixture dir_test = os.path.abspath(os.path.join(__file__, '../')) diff --git a/tests/test_run_simulator.py b/tests/test_run_simulator.py index 79ab5ba2ac14b77449a9bdfa8487c725d03752e3..7096e9782238d65df7a1cd012b673c34a49d2c0a 100644 --- a/tests/test_run_simulator.py +++ b/tests/test_run_simulator.py @@ -1,8 +1,8 @@ -from psimpy.simulator.run_simulator import RunSimulator +import os import pytest import numpy as np -import os from beartype.roar import BeartypeCallHintParamViolation +from psimpy.simulator import RunSimulator def add(a, b, c , d=100, save=False, filename=None): if save is True: diff --git a/tests/test_saltelli.py b/tests/test_saltelli.py index d9331c53372e66c63a0d07bc4e000bb07808bcec..fffcadc986c1c314e849925582a9c4a6ed2a0d4a 100644 --- a/tests/test_saltelli.py +++ b/tests/test_saltelli.py @@ -1,7 +1,7 @@ import pytest import numpy as np from SALib.sample.saltelli import sample -from psimpy.sampler.saltelli import Saltelli +from psimpy.sampler import Saltelli from beartype.roar import BeartypeCallHintParamViolation diff --git a/tests/test_sobol.py b/tests/test_sobol.py index f4c651006422d0acbafd0ed6577d0dd3a5bee95e..0db41bdc9b278e0705468166caea1f9a6e360aed 100644 --- a/tests/test_sobol.py +++ b/tests/test_sobol.py @@ -1,10 +1,9 @@ import pytest import numpy as np -from psimpy.sampler.saltelli import Saltelli -from psimpy.sampler.latin import LHS -from psimpy.emulator.robustgasp import ScalarGaSP -from psimpy.sensitivity.sobol import SobolAnalyze - +from psimpy.sampler import Saltelli +from psimpy.sampler import LHS +from psimpy.emulator import ScalarGaSP +from psimpy.sensitivity import SobolAnalyze def f(x1,x2,x3): return np.sin(x1) + 7*np.sin(x2)**2 + 0.1*x3**4*np.sin(x1) @@ -42,7 +41,6 @@ def test_SobolAnalyze(calc_second_order, skip_values, nbase, seed, mode, print('analytical S1: \n', [0.314, 0.442, 0]) - @pytest.mark.parametrize( "calc_second_order, skip_values, nbase, seed, mode, max_workers", [ diff --git a/tests/test_util_funcs.py b/tests/test_util_funcs.py index c2699960b458ebf7e07112ef81620fb9051b2d55..d8141a1d72138af7f6fa4aed7ecb3d06b467f9d2 100644 --- a/tests/test_util_funcs.py +++ b/tests/test_util_funcs.py @@ -1,7 +1,8 @@ -import numpy as np import pytest +import numpy as np +from beartype.roar import BeartypeCallHintParamViolation from psimpy.utility.util_funcs import scale_samples -import beartype + @pytest.mark.parametrize( 'samples, bounds', @@ -11,7 +12,7 @@ import beartype ] ) def test_scale_samples_TypeError(samples, bounds): - with pytest.raises(beartype.roar.BeartypeCallHintParamViolation): + with pytest.raises(BeartypeCallHintParamViolation): scale_samples(samples, bounds) @pytest.mark.parametrize(