From 934e8e10cacfa50f4e516d1848396e11dfb39311 Mon Sep 17 00:00:00 2001
From: Leah Tacke genannt Unterberg <leah.tgu@pads.rwth-aachen.de>
Date: Wed, 3 May 2023 11:49:53 +0200
Subject: [PATCH] initial
---
.gitignore | 37 +
.streamlit/config.toml | 2 +
README.md | 3 +
logic/page_logic.py | 97 +
pages/demo_page.py | 14 +
poetry.lock | 3647 +++++++++++++++++++++++++++++++++++++
pyproject.toml | 23 +
resources/mock_data.csv | 13 +
resources/mock_header.csv | 6 +
streamlit_app.py | 14 +
10 files changed, 3856 insertions(+)
create mode 100644 .gitignore
create mode 100644 .streamlit/config.toml
create mode 100644 README.md
create mode 100644 logic/page_logic.py
create mode 100644 pages/demo_page.py
create mode 100644 poetry.lock
create mode 100644 pyproject.toml
create mode 100644 resources/mock_data.csv
create mode 100644 resources/mock_header.csv
create mode 100644 streamlit_app.py
diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..14dfab2
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,37 @@
+########################################################################
+# Python - https://github.com/github/gitignore/blob/master/Python.gitignore
+########################################################################
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# Distribution / packaging
+build/
+dist/
+eggs/
+.eggs/
+*.egg-info/
+*.egg
+.prerelease-version
+
+# Autogenerated Protobufs
+lib/streamlit/proto/*_pb2.py
+lib/streamlit/proto/*_pb2.pyi
+frontend/src/lib/proto.js
+frontend/src/lib/proto.d.ts
+
+########################################################################
+# Streamlit
+########################################################################
+#.streamlit/
+lib/streamlit/static
+streamlit-storage
+
+# Data Files
+uploads
+
+########################################################################
+# JetBrains
+########################################################################
+.idea
\ No newline at end of file
diff --git a/.streamlit/config.toml b/.streamlit/config.toml
new file mode 100644
index 0000000..8c550be
--- /dev/null
+++ b/.streamlit/config.toml
@@ -0,0 +1,2 @@
+[server]
+maxUploadSize = 4096
\ No newline at end of file
diff --git a/README.md b/README.md
new file mode 100644
index 0000000..946bbed
--- /dev/null
+++ b/README.md
@@ -0,0 +1,3 @@
+This is the official machine data visualization app package.
+
+It is built atop the base mdata package and makes conversion and visualization tools contained therein interactively accessible.
\ No newline at end of file
diff --git a/logic/page_logic.py b/logic/page_logic.py
new file mode 100644
index 0000000..2f7e5df
--- /dev/null
+++ b/logic/page_logic.py
@@ -0,0 +1,97 @@
+import numpy as np
+import pandas as pd
+import streamlit as st
+from mdata.visualization import plotting
+from plotly import graph_objects as go
+from plotly.subplots import make_subplots
+
+available_widgets = ['Specifications', 'Raw Data', 'Overview', 'Inspector']
+
+
+def generate_page(md, widget):
+ c = st.columns(3)
+ c[0].metric('#Observations', len(md.index_frame))
+ c[1].metric('#Event Types', len(md.event_series_types))
+ c[2].metric('#Measurement Types', len(md.measurement_series_types))
+
+ c = st.columns(2)
+ cont = c[0].container()
+ cont.text(md.index_frame['time'].min())
+ cont.caption('First Observation')
+ cont = c[1].container()
+ cont.text(md.index_frame['time'].max())
+ cont.caption('Last Observation')
+
+ if widget not in available_widgets:
+ return
+
+ if widget == 'Specifications':
+ st.markdown('## Events')
+ st.table(make_spec_df(md.event_series_types))
+ st.markdown('## Measurements')
+ st.table(make_spec_df(md.measurement_series_types))
+
+ if widget == 'Raw Data':
+ st.write(md.index_frame)
+
+ if widget == 'Overview':
+ f = plotting.create_overview_plot(md, downsample_to=5_000)
+ st.plotly_chart(f, use_container_width=True)
+
+ if widget == 'Inspector':
+ c1, c2, c3 = st.columns(3)
+ object_list = list(md.get_unique_objects())
+ event_type_list = list(md.event_series_types.keys())
+ measurement_type_list = list(md.measurement_series_types.keys())
+ selected_measurement_type = c1.selectbox('Measurement Type', measurement_type_list)
+ fs = md.measurement_series_types[selected_measurement_type].features
+ measurement_feature_selection = c1.multiselect('Feature Selection', fs)
+
+ event_selection = c2.multiselect('Event Type Selection', event_type_list)
+
+ object_selection = c3.selectbox('Object Selection', object_list)
+
+ df = md.measurement_series[selected_measurement_type].df
+
+ downsample_to = 15_000
+ should_downsample = False
+ if len(df) > downsample_to:
+ st.text('will have to downsample ☹️')
+ should_downsample = True
+ from tsdownsample import MinMaxLTTBDownsampler
+ sampler = MinMaxLTTBDownsampler()
+
+ df = df.loc[df.object == object_selection, ['time'] + measurement_feature_selection]
+
+ fig = make_subplots(rows=2, cols=1, row_heights=[0.9, 0.1], shared_xaxes=True, vertical_spacing=0.05)
+
+ for f in measurement_feature_selection:
+ # go.scatter.Line()
+ x, y = df.time, df[f]
+ if should_downsample:
+ x = x.values
+ y = y.values
+ sidx = sampler.downsample(x, y, n_out=downsample_to)
+ x = x[sidx] # .iloc[sidx, 'time']
+ y = y[sidx] # .iloc[sidx, f]
+
+ fig.add_trace(go.Scattergl(name=f, x=x, y=y, mode='lines'), row=1, col=1)
+ for e in event_selection:
+ edf = md.event_series[e].df
+ edf = edf.loc[edf.object == object_selection]
+ fig.add_trace(
+ go.Scatter(name=e, x=edf.time, y=np.zeros_like(edf.time), mode='markers',
+ marker=dict(size=10, line_width=4, symbol='line-ns-open')), row=2, col=1)
+
+ fig.update_yaxes(row=2, col=1, visible=False)
+ fig.update_layout(title_text='Timeseries', showlegend=True,
+ legend=dict(x=0, y=-0.2, orientation='h'))
+
+ st.plotly_chart(fig, use_container_width=True)
+
+
+def make_spec_df(spec_types):
+ df = pd.DataFrame.from_dict({l: list(t.features) for l, t in spec_types.items()},
+ orient='index').replace(pd.NA, '')
+ df.columns = [f'f_{i}' for i in range(1, len(df.columns) + 1)]
+ return df
diff --git a/pages/demo_page.py b/pages/demo_page.py
new file mode 100644
index 0000000..3bf56db
--- /dev/null
+++ b/pages/demo_page.py
@@ -0,0 +1,14 @@
+import mdata.file_formats.csv
+import streamlit as st
+
+from logic.page_logic import generate_page, available_widgets
+
+
+@st.cache_data
+def load_data():
+ return mdata.file_formats.csv.read_machine_data('resources/mock_header.csv', 'resources/mock_data.csv')
+
+
+md = load_data()
+selected_widget = st.sidebar.selectbox('Widget', available_widgets)
+generate_page(md, selected_widget)
diff --git a/poetry.lock b/poetry.lock
new file mode 100644
index 0000000..c8159a6
--- /dev/null
+++ b/poetry.lock
@@ -0,0 +1,3647 @@
+# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand.
+
+[[package]]
+name = "altair"
+version = "4.2.2"
+description = "Altair: A declarative statistical visualization library for Python."
+category = "main"
+optional = false
+python-versions = ">=3.7"
+files = [
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+ {file = "altair-4.2.2.tar.gz", hash = "sha256:39399a267c49b30d102c10411e67ab26374156a84b1aeb9fcd15140429ba49c5"},
+]
+
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+entrypoints = "*"
+jinja2 = "*"
+jsonschema = ">=3.0"
+numpy = "*"
+pandas = ">=0.18"
+toolz = "*"
+
+[package.extras]
+dev = ["black", "docutils", "flake8", "ipython", "m2r", "mistune (<2.0.0)", "pytest", "recommonmark", "sphinx", "vega-datasets"]
+
+[[package]]
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+
+[[package]]
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+docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+testing = ["big-O", "flake8 (<5)", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"]
+
+[metadata]
+lock-version = "2.0"
+python-versions = "^3.9,!=3.9.7"
+content-hash = "ac96a4ac5737561fdeee2f5476848ef21b65a267c2d918bce83f8b01eb81f740"
diff --git a/pyproject.toml b/pyproject.toml
new file mode 100644
index 0000000..590d94f
--- /dev/null
+++ b/pyproject.toml
@@ -0,0 +1,23 @@
+[tool.poetry]
+name = "mdata-app"
+version = "0.1.0"
+description = ""
+authors = ["Leah Tacke genannt Unterberg <leah.tgu@pads.rwth-aachen.de>"]
+packages = [{ include = "mdata_app" }]
+readme = "README.md"
+license = "MIT"
+
+[tool.poetry.dependencies]
+python = "^3.9,!=3.9.7"
+# flask = "^2.2.3"
+streamlit = "^1.21"
+mdata = { path = "C:/Users/Leah/PycharmProjects/mdata", develop = true }
+# mdata = { git = "git@git-ce.rwth-aachen.de:leah.tgu/mdata.git", branch = "master" }
+seaborn = "^0.12.2"
+plotly = "^5.14.1"
+tsdownsample = "^0.1.2"
+
+
+[build-system]
+requires = ["poetry-core"]
+build-backend = "poetry.core.masonry.api"
diff --git a/resources/mock_data.csv b/resources/mock_data.csv
new file mode 100644
index 0000000..6e75942
--- /dev/null
+++ b/resources/mock_data.csv
@@ -0,0 +1,13 @@
+time,object,type,label,f_1,f_2,f_3
+2023-04-24T09:57:10.0,m_1,E,on
+2023-04-24T09:57:15.0,m_1,M,source_A,50,6.9,4
+2023-04-24T09:58:00.0,m_1,M,source_B,2,-3.5,90
+2023-04-24T09:59:45.0,m_1,E,error,"exceptional behavior"
+2023-04-24T10:00:00.0,m_1,M,source_B,1,-4,80
+2023-04-24T10:00:15.0,m_1,M,source_A,50,7,-4
+2023-04-24T10:01:10.0,m_1,E,error,"cascading exceptional behavior"
+2023-04-24T10:02:00.0,m_1,M,source_B,.5,-4.5,75
+2023-04-24T10:03:15.0,m_1,M,source_A,20,7.2,-40
+2023-04-24T10:03:55.0,m_1,E,rapid_unplanned_disassembly,200
+2023-04-24T10:04:00.0,m_1,M,source_B,NaN,NaN,NaN
+2023-04-24T10:05:00.0,m_1,E,off
diff --git a/resources/mock_header.csv b/resources/mock_header.csv
new file mode 100644
index 0000000..60b9899
--- /dev/null
+++ b/resources/mock_header.csv
@@ -0,0 +1,6 @@
+E,on
+E,off
+E,error,code
+E,rapid_unplanned_disassembly,explosion_size
+M,source_A,x,y,z
+M,source_B,f,r,phi
diff --git a/streamlit_app.py b/streamlit_app.py
new file mode 100644
index 0000000..97be241
--- /dev/null
+++ b/streamlit_app.py
@@ -0,0 +1,14 @@
+import streamlit as st
+
+from logic.switch_page import switch_page
+
+st.set_page_config(layout="wide")
+
+st.title('Welcome to the Machine Data Demo Website')
+
+got_to_demo = st.button('Got to Demo')
+go_to_file_viewer = st.button('Got to File Viewer')
+if got_to_demo:
+ switch_page('demo_page')
+elif go_to_file_viewer:
+ switch_page('upload_page')
--
GitLab