diff --git a/CMakeLists.txt b/CMakeLists.txt index 4be1bda5ff62de14be5e0667e4bd6fd2d3160bf9..5bc00aad76fa162d463c175d2306f86d6a89a92c 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -4,6 +4,7 @@ project(eisnoise C CXX) find_package(PkgConfig REQUIRED) pkg_search_module(EIS REQUIRED libeisgenerator) +pkg_search_module(TYPE REQUIRED libkisstype) find_package(sciplot) set(API_HEADERS_CPP_DIR eisnoise/) @@ -22,9 +23,9 @@ set(COMMON_COMPILE_OPTIONS "-fno-strict-aliasing") add_library(${PROJECT_NAME} SHARED eisnoise.cpp microtar.c) -target_link_libraries( ${PROJECT_NAME} -lpthread ${EIS_LIBRARIES} -ltbb) +target_link_libraries( ${PROJECT_NAME} -lpthread ${EIS_LIBRARIES} ${TYPE_LIBRARIES} -ltbb) target_sources(${PROJECT_NAME} INTERFACE FILE_SET header_set TYPE HEADERS BASE_DIRS ${API_HEADERS_CPP_DIR} FILES ${API_HEADERS_CPP}) -target_include_directories(${PROJECT_NAME} PRIVATE ${EIS_INCLUDE_DIRS}) +target_include_directories(${PROJECT_NAME} PRIVATE ${EIS_INCLUDE_DIRS} ${TYPE_INCLUDE_DIRS}) target_compile_definitions(${PROJECT_NAME} PUBLIC DATA_DIR="${CMAKE_CURRENT_SOURCE_DIR}") target_compile_options(${PROJECT_NAME} PRIVATE ${COMMON_COMPILE_OPTIONS}) configure_file(pkgconfig/libeisnoise.in pkgconfig/libeisnoise.pc @ONLY) @@ -38,8 +39,8 @@ else() link_directories(${CMAKE_CURRENT_BINARY_DIR}) add_executable(${PROJECT_NAME}_test main.cpp) add_dependencies(${PROJECT_NAME}_test ${PROJECT_NAME}) - target_link_libraries( ${PROJECT_NAME}_test -lpthread ${EIS_LIBRARIES} -l${PROJECT_NAME} -ltbb ${SCIPLOT_LIBRARIES}) - target_include_directories(${PROJECT_NAME}_test PRIVATE ${EIS_INCLUDE_DIRS} ${SCIPLOT_INCLUDE_DIRECTORYS}) + target_link_libraries( ${PROJECT_NAME}_test -lpthread ${EIS_LIBRARIES} -l${PROJECT_NAME} -ltbb ${SCIPLOT_LIBRARIES} ${TYPE_LIBRARIES}) + target_include_directories(${PROJECT_NAME}_test PRIVATE ${EIS_INCLUDE_DIRS} ${SCIPLOT_INCLUDE_DIRECTORYS} ${TYPE_INCLUDE_DIRS}) target_compile_options(${PROJECT_NAME}_test PRIVATE ${COMMON_COMPILE_OPTIONS}) endif() diff --git a/dataassembler/CMakeLists.txt b/dataassembler/CMakeLists.txt index dfb5c1a926d123f20fe2a3f8e452cf6ca3152a7d..b26823dba566d67d46edd443e2e7529f1ebeae66 100644 --- a/dataassembler/CMakeLists.txt +++ b/dataassembler/CMakeLists.txt @@ -9,10 +9,11 @@ set(SRC_FILES find_package(PkgConfig REQUIRED) pkg_search_module(EIS REQUIRED libeisgenerator) +pkg_search_module(TYPE REQUIRED libkisstype) add_executable(${NAME} ${SRC_FILES}) -target_link_libraries( ${NAME} ${RLX_LIBRARIES} -lpthread ${EIS_LIBRARIES} -ltbb) -target_include_directories(${NAME} PRIVATE ${RLX_INCLUDE_DIRS} ${EIS_INCLUDE_DIRS}) +target_link_libraries( ${NAME} ${RLX_LIBRARIES} -lpthread ${EIS_LIBRARIES} ${TYPE_LIBRARIES} -ltbb) +target_include_directories(${NAME} PRIVATE ${RLX_INCLUDE_DIRS} ${EIS_INCLUDE_DIRS} ${TYPE_INCLUDE_DIRS}) target_compile_options(${NAME} PRIVATE "-Wall" "-Wno-reorder" diff --git a/dataassembler/main.cpp b/dataassembler/main.cpp index 29f24573cec3f968bfdd5e50eed52502f2b791e3..b999609068e868c6bb15df1496f5a1a5195d4955 100644 --- a/dataassembler/main.cpp +++ b/dataassembler/main.cpp @@ -6,8 +6,8 @@ #include <execution> #include <mutex> #include <sstream> +#include <kisstype/spectra.h> -#include "eistype.h" #include "microtar.h" bool isCsv(const std::filesystem::path& path) @@ -46,9 +46,9 @@ public: } }; -eis::EisSpectra loadAndDiffFile(const std::filesystem::path& path) +eis::Spectra loadAndDiffFile(const std::filesystem::path& path) { - eis::EisSpectra spectra = eis::EisSpectra::loadFromDisk(path); + eis::Spectra spectra = eis::Spectra::loadFromDisk(path); spectra.header = ""; std::sort(spectra.data.begin(), spectra.data.end()); @@ -90,7 +90,7 @@ int main(int argc, char** argv) } std::vector<std::filesystem::path> files = getFilesInDirectories(argv[1], &isCsv); - std::vector<eis::EisSpectra> spectras; + std::vector<eis::Spectra> spectras; spectras.reserve(files.size()); std::mutex spectrasMutex; @@ -98,7 +98,7 @@ int main(int argc, char** argv) { try { - eis::EisSpectra spectra = loadAndDiffFile(path); + eis::Spectra spectra = loadAndDiffFile(path); spectrasMutex.lock(); std::cout<<"Loaded "<<path<<'\n'; spectras.push_back(spectra); diff --git a/eisnoise.cpp b/eisnoise.cpp index 2a295c8ae92cc8ac995d1689f95da66c45342955..62e96182383f8aab0a4a55c6772192293b59c92a 100644 --- a/eisnoise.cpp +++ b/eisnoise.cpp @@ -10,7 +10,7 @@ #define INCBIN_PREFIX r #include "incbin.h" #include "microtar.h" -#include <eisgenerator/eistype.h> +#include <kisstype/type.h> #include <eisgenerator/basicmath.h> INCBIN(Tar, DATA_DIR "/data.tar"); @@ -137,7 +137,7 @@ EisNoise::EisNoise(fvalue maxIntensity) mtar_read_data(&tar, buff, h.size); std::istringstream ss(std::string(buff, h.size)); Noise noise; - noise.spectra = eis::EisSpectra::loadFromStream(ss); + noise.spectra = eis::Spectra::loadFromStream(ss); noise.name = h.name; noise.omegaMax = noise.spectra.data.back().omega; noise.omegaMin = noise.spectra.data.front().omega; diff --git a/eisnoise/eisnoise.h b/eisnoise/eisnoise.h index 63106993e5f1544d4fe6798037aacf8677000da0..022959553af56183761f6f3c8f66b07b363601d0 100644 --- a/eisnoise/eisnoise.h +++ b/eisnoise/eisnoise.h @@ -1,6 +1,7 @@ #pragma once -#include <eisgenerator/eistype.h> +#include <kisstype/type.h> +#include <kisstype/spectra.h> #include <vector> #include <exception> #include <string> @@ -14,7 +15,7 @@ private: std::string name; fvalue omegaMax; fvalue omegaMin; - eis::EisSpectra spectra; + eis::Spectra spectra; }; std::vector<Noise> noises; diff --git a/main.cpp b/main.cpp index 443a14287db761ce56ee302faa1f4afff004ff70..e3f6b1309754a8301bfa03fee3e2574f0feb8970 100644 --- a/main.cpp +++ b/main.cpp @@ -1,5 +1,4 @@ #include "eisnoise/eisnoise.h" -#include "eistype.h" #include "log.h" #include <eisgenerator/model.h> #include <iostream> @@ -77,7 +76,7 @@ int main(int argc, char** argv) plot.drawCurve(arrays.first, arrays.second); - eis::EisSpectra(data, model.getModelStrWithParam(index), "").saveToStream(std::cout); + eis::Spectra(data, model.getModelStrWithParam(index), "").saveToStream(std::cout); std::cout<<eis::nonConstantScore(data)<<'\n'; }